Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
IFT140Q96RY7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
IFT140Q96RY7 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.34□□□□□ -1.39
IFT140Q96RY7 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.34□□□□□ -1.39
IFT140Q96RY7 AC007823.1-201ENST00000569932 1566 ntBASIC6.34□□□□□ -1.39
IFT140Q96RY7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.34□□□□□ -1.39
IFT140Q96RY7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
IFT140Q96RY7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
IFT140Q96RY7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.34□□□□□ -1.4
IFT140Q96RY7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC6.34□□□□□ -1.4
IFT140Q96RY7 RANP8-201ENST00000444720 713 ntBASIC6.34□□□□□ -1.4
IFT140Q96RY7 AC090602.1-201ENST00000469695 252 ntBASIC6.34□□□□□ -1.4
IFT140Q96RY7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.34□□□□□ -1.4
IFT140Q96RY7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.34□□□□□ -1.4
IFT140Q96RY7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.34□□□□□ -1.4
IFT140Q96RY7 AC084759.1-201ENST00000561168 290 ntBASIC6.34□□□□□ -1.4
IFT140Q96RY7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.34□□□□□ -1.4
IFT140Q96RY7 AC068790.5-201ENST00000602741 355 ntBASIC6.34□□□□□ -1.4
IFT140Q96RY7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.34□□□□□ -1.4
IFT140Q96RY7 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
IFT140Q96RY7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.4
IFT140Q96RY7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6.33□□□□□ -1.4
IFT140Q96RY7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC6.33□□□□□ -1.4
IFT140Q96RY7 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
IFT140Q96RY7 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
IFT140Q96RY7 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.33□□□□□ -1.4
IFT140Q96RY7 UBA52P6-201ENST00000399822 382 ntBASIC6.33□□□□□ -1.4
IFT140Q96RY7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC6.33□□□□□ -1.4
IFT140Q96RY7 AC096644.3-201ENST00000416788 338 ntBASIC6.33□□□□□ -1.4
IFT140Q96RY7 USP9YP36-201ENST00000424581 829 ntBASIC6.33□□□□□ -1.4
IFT140Q96RY7 USP9YP31-201ENST00000431405 881 ntBASIC6.33□□□□□ -1.4
IFT140Q96RY7 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.33□□□□□ -1.4
IFT140Q96RY7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC6.33□□□□□ -1.4
IFT140Q96RY7 AC010285.3-201ENST00000511668 676 ntBASIC6.33□□□□□ -1.4
IFT140Q96RY7 AC010342.1-201ENST00000514047 877 ntBASIC6.33□□□□□ -1.4
IFT140Q96RY7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.33□□□□□ -1.4
IFT140Q96RY7 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
IFT140Q96RY7 AC006077.1-201ENST00000604746 343 ntBASIC6.33□□□□□ -1.4
IFT140Q96RY7 AL139089.1-201ENST00000620372 975 ntBASIC6.33□□□□□ -1.4
IFT140Q96RY7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
IFT140Q96RY7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
IFT140Q96RY7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
IFT140Q96RY7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC6.32□□□□□ -1.4
IFT140Q96RY7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.32□□□□□ -1.4
IFT140Q96RY7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
IFT140Q96RY7 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
IFT140Q96RY7 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
IFT140Q96RY7 AL031121.1-201ENST00000406553 254 ntBASIC6.32□□□□□ -1.4
IFT140Q96RY7 RPL21P110-201ENST00000433345 446 ntBASIC6.32□□□□□ -1.4
IFT140Q96RY7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.32□□□□□ -1.4
IFT140Q96RY7 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.32□□□□□ -1.4
IFT140Q96RY7 AC104662.1-201ENST00000604448 511 ntBASIC6.32□□□□□ -1.4
IFT140Q96RY7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.32□□□□□ -1.4
IFT140Q96RY7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
IFT140Q96RY7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC6.31□□□□□ -1.4
IFT140Q96RY7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
IFT140Q96RY7 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
IFT140Q96RY7 SNORA3C-201ENST00000408792 125 ntBASIC6.31□□□□□ -1.4
IFT140Q96RY7 AC010740.1-201ENST00000417035 684 ntBASIC6.31□□□□□ -1.4
IFT140Q96RY7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.31□□□□□ -1.4
IFT140Q96RY7 RPS3AP14-201ENST00000483907 780 ntBASIC6.31□□□□□ -1.4
IFT140Q96RY7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.31□□□□□ -1.4
IFT140Q96RY7 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.31□□□□□ -1.4
IFT140Q96RY7 AC103968.1-201ENST00000557841 573 ntBASIC6.31□□□□□ -1.4
IFT140Q96RY7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.31□□□□□ -1.4
IFT140Q96RY7 AC116312.1-201ENST00000606841 314 ntBASIC6.31□□□□□ -1.4
IFT140Q96RY7 MIR7112-201ENST00000616126 65 ntBASIC6.31□□□□□ -1.4
IFT140Q96RY7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
IFT140Q96RY7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
IFT140Q96RY7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC6.3□□□□□ -1.4
IFT140Q96RY7 AL121878.1-201ENST00000418638 859 ntBASIC6.3□□□□□ -1.4
IFT140Q96RY7 RPS17P13-201ENST00000448974 407 ntBASIC6.3□□□□□ -1.4
IFT140Q96RY7 AC025518.1-201ENST00000479856 347 ntBASIC6.3□□□□□ -1.4
IFT140Q96RY7 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.3□□□□□ -1.4
IFT140Q96RY7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.3□□□□□ -1.4
IFT140Q96RY7 NCAPGP2-201ENST00000557911 754 ntBASIC6.3□□□□□ -1.4
IFT140Q96RY7 MTCO3P22-201ENST00000603219 784 ntBASIC6.3□□□□□ -1.4
IFT140Q96RY7 AC023509.5-201ENST00000617434 807 ntBASIC6.3□□□□□ -1.4
IFT140Q96RY7 AC079684.1-201ENST00000621405 437 ntBASIC6.3□□□□□ -1.4
IFT140Q96RY7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.3□□□□□ -1.4
IFT140Q96RY7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
IFT140Q96RY7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.3□□□□□ -1.4
IFT140Q96RY7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
IFT140Q96RY7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
IFT140Q96RY7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
IFT140Q96RY7 MARK2P15-201ENST00000432204 2186 ntBASIC6.29□□□□□ -1.4
IFT140Q96RY7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
IFT140Q96RY7 SNORA38.1-201ENST00000364172 131 ntBASIC6.29□□□□□ -1.4
IFT140Q96RY7 RPS23P10-201ENST00000416185 486 ntBASIC6.29□□□□□ -1.4
IFT140Q96RY7 AL831737.1-201ENST00000441288 271 ntBASIC6.29□□□□□ -1.4
IFT140Q96RY7 OR52Y1P-201ENST00000452418 828 ntBASIC6.29□□□□□ -1.4
IFT140Q96RY7 BTF3P5-201ENST00000457252 467 ntBASIC6.29□□□□□ -1.4
IFT140Q96RY7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.29□□□□□ -1.4
IFT140Q96RY7 AC016839.1-201ENST00000578162 867 ntBASIC6.29□□□□□ -1.4
IFT140Q96RY7 AC010591.1-201ENST00000603941 649 ntBASIC6.29□□□□□ -1.4
IFT140Q96RY7 AC015922.4-201ENST00000612568 690 ntBASIC6.29□□□□□ -1.4
IFT140Q96RY7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
IFT140Q96RY7 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
IFT140Q96RY7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
IFT140Q96RY7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms