Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RPF2P1-201ENST00000424137 906 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 RPEP3-201ENST00000425462 676 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC010154.1-201ENST00000425857 269 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC017019.1-201ENST00000426129 261 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC114755.4-201ENST00000439114 443 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MRPS17P3-201ENST00000465453 385 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC087672.1-201ENST00000479876 766 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 NIFKP7-201ENST00000503365 834 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 USP9YP1-201ENST00000513521 1002 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC008885.1-201ENST00000514930 301 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 ARL2BPP5-201ENST00000523141 481 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC073916.1-201ENST00000545095 130 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MIR5582-201ENST00000579697 68 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC013553.2-201ENST00000604244 589 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 BNIP3P4-201ENST00000604946 565 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AC096577.2-201ENST00000611455 153 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MIR6715A-201ENST00000615929 79 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 AL158209.2-201ENST00000619266 216 ntBASIC1.72□□□□□ -2.13
HMCN1Q96RW7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 ACACB-201ENST00000338432 9360 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
HMCN1Q96RW7 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
HMCN1Q96RW7 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
HMCN1Q96RW7 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
HMCN1Q96RW7 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
HMCN1Q96RW7 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
HMCN1Q96RW7 ACSBG1-201ENST00000258873 6357 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 U8.6-201ENST00000364939 135 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 GCNT6-201ENST00000379591 934 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MIR449B-201ENST00000384995 97 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL592291.1-201ENST00000403830 352 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNU4-25P-201ENST00000410569 230 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC084290.1-201ENST00000434995 374 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL512286.1-201ENST00000439244 400 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC092641.1-201ENST00000440229 772 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RPS24P6-201ENST00000452670 400 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MTATP6P14-201ENST00000455189 673 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SNORA31.13-201ENST00000516624 135 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNU6-794P-201ENST00000517261 64 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RNA5SP373-201ENST00000517271 95 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 IGKV3D-31-201ENST00000519131 281 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 MTCO1P49-201ENST00000523429 802 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 BMPR1APS2-201ENST00000527904 1012 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL121594.2-201ENST00000541658 472 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 BNIP3P6-201ENST00000549284 499 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AC009120.3-201ENST00000563335 499 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 RBM4-213ENST00000578778 582 ntTSL 4 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL450336.1-201ENST00000605180 586 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 AL356118.1-201ENST00000635272 1078 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 HSPA8P17-201ENST00000427029 1382 ntBASIC1.71□□□□□ -2.14
HMCN1Q96RW7 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
HMCN1Q96RW7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms