Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 SNORD65.1-201ENST00000390889 71 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 FABP12P1-201ENST00000401911 322 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC016769.2-201ENST00000414815 475 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 BMS1P17-202ENST00000416720 316 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AL133173.1-201ENST00000423458 397 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC124944.2-201ENST00000429866 1242 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 LYPLA1P1-201ENST00000434514 622 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC092809.1-201ENST00000441469 474 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 AL035551.1-201ENST00000446931 348 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 FAR2P1-206ENST00000449736 709 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 AL645937.3-201ENST00000453647 936 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 VPS26AP1-201ENST00000483197 979 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC073358.1-201ENST00000505671 684 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 MTND6P2-201ENST00000512226 524 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 HMGN1P9-201ENST00000515212 298 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 RN7SKP46-201ENST00000515942 234 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC004825.1-201ENST00000555068 586 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 MIR3176-201ENST00000582210 90 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AF131215.7-201ENST00000602443 707 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC233280.2-201ENST00000603917 1070 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC013244.1-201ENST00000604279 193 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC092653.1-201ENST00000608509 531 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC097505.1-201ENST00000610199 565 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AL133243.1-201ENST00000614487 366 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AL158063.1-201ENST00000615349 536 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AP003072.4-201ENST00000624580 310 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AP003400.3-201ENST00000624904 346 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AL049536.1-201ENST00000625043 744 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 ATE1-AS1-202ENST00000636460 506 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 AC005539.1-201ENST00000443768 1479 ntBASIC4.85□□□□□ -1.63
SNX18Q96RF0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SNX18Q96RF0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SNX18Q96RF0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX18Q96RF0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX18Q96RF0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC112198.2-201ENST00000426589 6996 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX18Q96RF0 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX18Q96RF0 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX18Q96RF0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX18Q96RF0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC025263.3-201ENST00000622965 1396 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SNX18Q96RF0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AL391994.1-201ENST00000254724 282 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC013442.1-201ENST00000397347 228 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AL121978.1-201ENST00000402778 359 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AL031577.2-201ENST00000404133 280 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 Y_RNA.619-201ENST00000410951 90 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 RPL12P9-201ENST00000412942 488 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 OR6E1P-201ENST00000414424 923 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AL596448.1-201ENST00000415024 392 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 MTCO1P21-201ENST00000416634 589 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 RPL36AP10-201ENST00000421785 322 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 BX510359.3-201ENST00000422168 306 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC244035.1-201ENST00000430042 390 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 RPS24P8-201ENST00000431490 402 ntBASIC4.84□□□□□ -1.63
SNX18Q96RF0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms