Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 MIR4646-201ENST00000580775 63 ntBASIC3.05□□□□□ -1.92
AP1S3Q96PC3 AP001180.3-201ENST00000582221 145 ntBASIC3.05□□□□□ -1.92
AP1S3Q96PC3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 AL049844.2-201ENST00000604280 628 ntBASIC3.05□□□□□ -1.92
AP1S3Q96PC3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 uc_338.13-201ENST00000618243 179 ntBASIC3.05□□□□□ -1.92
AP1S3Q96PC3 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.05□□□□□ -1.92
AP1S3Q96PC3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.05□□□□□ -1.92
AP1S3Q96PC3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
AP1S3Q96PC3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 NOL8P1-201ENST00000508336 3529 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC008033.1-201ENST00000216407 1162 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 PGBD4P8-201ENST00000412993 562 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 RPL30P2-201ENST00000414021 291 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC009237.5-201ENST00000414271 501 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC104837.2-201ENST00000427236 424 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 RPL23AP1-201ENST00000428990 471 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 RPL31P44-201ENST00000447680 377 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 OR52Y1P-201ENST00000452418 828 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC099489.2-201ENST00000574976 260 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 MIR3186-201ENST00000577404 85 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC006270.2-201ENST00000578523 652 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 RN7SL690P-201ENST00000582087 240 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 MIR4310-201ENST00000582950 57 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AL592436.1-201ENST00000605135 558 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC015722.2-201ENST00000622210 551 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 AC093010.3-201ENST00000570269 15214 ntBASIC3.04□□□□□ -1.92
AP1S3Q96PC3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AC138393.1-206ENST00000540997 1886 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 RNU1-130P-201ENST00000363930 160 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 SNORD113.2-201ENST00000364166 89 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 RPL31P52-201ENST00000407532 367 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AC069218.2-201ENST00000411665 344 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 RPL7AP25-201ENST00000423357 805 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 RPL30P3-201ENST00000424262 333 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 VN1R25P-201ENST00000443385 738 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 VN1R40P-201ENST00000455196 941 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 RPS3AP41-201ENST00000462701 778 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AP002884.2-201ENST00000471647 395 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 RPL12P20-201ENST00000475538 479 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AC005912.1-201ENST00000495392 255 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 RPL29P14-201ENST00000495837 428 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AP001922.4-201ENST00000526967 290 ntBASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC3.03□□□□□ -1.92
AP1S3Q96PC3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms