Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AP000756.2-201ENST00000624168 2567 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL21A1Q96P44 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL21A1Q96P44 RNU1-132P-201ENST00000364300 164 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 MIR1179-201ENST00000408703 91 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 RNA5SP36-201ENST00000410197 133 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 NRBF2P2-201ENST00000413087 861 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC099336.2-201ENST00000422457 254 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC234779.1-201ENST00000425910 285 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 Z85994.2-201ENST00000434327 452 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 CACYBPP1-201ENST00000438592 684 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL21A1Q96P44 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 TPT1P12-201ENST00000448968 492 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC099560.2-201ENST00000457554 255 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 RNA5SP49-201ENST00000516450 115 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 RNA5SP73-201ENST00000516744 108 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL21A1Q96P44 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 TVP23BP1-201ENST00000557500 617 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 HMGB3P26-201ENST00000560051 582 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC009303.3-201ENST00000591103 736 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 IPO5P1-202ENST00000600039 287 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC025946.2-201ENST00000603398 234 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AP004372.1-201ENST00000604842 844 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC064801.1-201ENST00000612025 407 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC114781.5-201ENST00000615297 108 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 MIR7702-201ENST00000621931 59 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC015908.5-201ENST00000623289 343 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AP000843.1-201ENST00000624880 701 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 AC008013.2-202ENST00000637965 364 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 AL031985.3-201ENST00000565390 2449 ntBASIC3.94□□□□□ -1.78
COL21A1Q96P44 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL21A1Q96P44 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL21A1Q96P44 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
COL21A1Q96P44 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL21A1Q96P44 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL21A1Q96P44 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL21A1Q96P44 RNU1-14P-201ENST00000362759 152 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 RNU6-618P-201ENST00000363518 112 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 RNA5SP366-201ENST00000365454 123 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 RN7SKP235-201ENST00000410662 305 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 RPL23AP26-201ENST00000412728 464 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 TRGV6-201ENST00000417928 299 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 AL590609.2-201ENST00000421430 368 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 AL391219.1-201ENST00000422570 483 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 MTND2P25-201ENST00000449028 610 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 AC109327.1-201ENST00000471666 403 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 RPS29P19-201ENST00000479709 171 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 RN7SL691P-201ENST00000494487 301 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 BNIP3P41-201ENST00000503774 571 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 HPRT1P1-201ENST00000509498 657 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 AC008958.1-201ENST00000511047 682 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 KCTD9P2-201ENST00000512203 1013 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL21A1Q96P44 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL21A1Q96P44 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 HMGB1P51-201ENST00000605166 638 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 HMGB1P50-201ENST00000605814 607 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 AL445423.1-201ENST00000609941 536 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 FAM27D1-201ENST00000612308 341 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 AL445363.3-201ENST00000623080 671 ntBASIC3.93□□□□□ -1.78
COL21A1Q96P44 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL21A1Q96P44 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL21A1Q96P44 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL21A1Q96P44 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
COL21A1Q96P44 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL21A1Q96P44 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL21A1Q96P44 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
COL21A1Q96P44 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL21A1Q96P44 AC009313.2-201ENST00000417893 1941 ntBASIC3.92□□□□□ -1.78
COL21A1Q96P44 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms