Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC104837.2-201ENST00000427236 424 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 PSMA2P3-201ENST00000429685 675 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC092170.1-201ENST00000440211 356 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 Z80107.2-201ENST00000445127 392 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 RPL6P5-201ENST00000445678 828 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 RPS3AP53-201ENST00000454716 778 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 GAPDHP56-201ENST00000506031 988 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 BTF3P13-201ENST00000513224 490 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 RNA5SP309-201ENST00000516670 106 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 OR5M2P-201ENST00000529003 936 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC116553.2-201ENST00000564203 463 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 RPL26P30-202ENST00000602923 645 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC025946.2-201ENST00000603398 234 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC112503.1-201ENST00000608436 391 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC121761.2-201ENST00000617300 689 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 AC087385.3-201ENST00000620477 187 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VMP1Q96GC9 KARSP3-201ENST00000571212 1504 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VMP1Q96GC9 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
VMP1Q96GC9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VMP1Q96GC9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VMP1Q96GC9 IRF5P1-201ENST00000504852 2164 ntBASIC4.6□□□□□ -1.67
VMP1Q96GC9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VMP1Q96GC9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VMP1Q96GC9 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VMP1Q96GC9 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VMP1Q96GC9 MIR16-2-201ENST00000362117 81 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 RN7SKP103-201ENST00000363848 320 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 SNORD96B-201ENST00000386148 79 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 MIR937-201ENST00000401271 86 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AL160275.2-201ENST00000412010 394 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 CEACAMP8-201ENST00000413902 580 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AL139128.1-201ENST00000413921 941 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AL158050.1-201ENST00000416077 457 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 RAC1P3-201ENST00000416129 580 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 OR2X1P-201ENST00000421144 687 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC234779.1-201ENST00000425910 285 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC093414.1-201ENST00000434712 514 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 RPL29P29-201ENST00000448725 423 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC093166.2-201ENST00000455969 1017 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 HMGB3P30-201ENST00000457863 606 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC083982.1-201ENST00000485679 344 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC108145.1-201ENST00000503770 153 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 MTND3P24-201ENST00000506306 329 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 MRPS33P2-201ENST00000507850 322 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC009117.1-201ENST00000563948 554 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 BGLT3-201ENST00000564523 994 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC095057.3-201ENST00000567102 1157 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC087783.2-201ENST00000605070 562 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 AC112503.2-201ENST00000609005 552 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 Mico1.1-201ENST00000611698 204 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AP001784.1-201ENST00000624107 428 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AL109659.3-201ENST00000624985 950 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 AP001002.1-201ENST00000625148 1513 ntBASIC4.59□□□□□ -1.67
VMP1Q96GC9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.59□□□□□ -1.67
VMP1Q96GC9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.59□□□□□ -1.68
VMP1Q96GC9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.59□□□□□ -1.68
VMP1Q96GC9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.68
VMP1Q96GC9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms