Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC004069.2-201ENST00000505438 1114 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 RNA5SP43-201ENST00000516559 110 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC025423.2-201ENST00000537570 439 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC063950.1-201ENST00000552036 308 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC234775.3-201ENST00000564612 656 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 MIR1273E-201ENST00000581165 102 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 NF1P5-201ENST00000588287 448 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC025175.1-201ENST00000606482 759 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC005828.7-201ENST00000607331 556 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC121761.2-201ENST00000617300 689 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 uc_338.9-201ENST00000617424 182 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC139769.3-201ENST00000618383 175 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AL022401.1-201ENST00000619498 108 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AC006065.6-201ENST00000625201 545 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 OR2L1P-202ENST00000641567 1023 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 ZNF137P-201ENST00000456718 1920 ntBASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.2□□□□□ -2.06
SPTSSBQ8NFR3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 SLC9B1P1-201ENST00000331172 1337 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 RNF19BPY-201ENST00000458209 1550 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AL513302.2-201ENST00000562313 1842 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 OR13C1P-202ENST00000641378 2919 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 RN7SKP280-201ENST00000364196 304 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 RNA5SP151-201ENST00000365632 117 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 GTF2IP5-201ENST00000414608 731 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC093155.2-201ENST00000420734 937 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 HNRNPA3P4-201ENST00000427514 803 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 OR2B8P-201ENST00000432841 938 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 LYPLA1P1-201ENST00000434514 622 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 HMGN2P20-201ENST00000437531 273 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 VN1R25P-201ENST00000443385 738 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 VN1R40P-201ENST00000455196 941 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 RPS15AP1-201ENST00000457423 391 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 RPL37P6-202ENST00000464216 403 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 OR2A1-AS1-202ENST00000467944 422 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC108145.1-201ENST00000503770 153 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 HPRT1P2-201ENST00000505250 544 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC006499.3-201ENST00000506077 748 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 RN7SKP289-201ENST00000517244 295 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC022826.1-201ENST00000519383 805 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 NDUFB9P3-201ENST00000521269 501 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 BMPR1APS2-201ENST00000527904 1012 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 OR5M2P-201ENST00000529003 936 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AL139174.1-201ENST00000531489 886 ntBASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC2.19□□□□□ -2.06
SPTSSBQ8NFR3 RN7SL652P-201ENST00000577769 300 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms