Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 CR392039.5-201ENST00000623201 510 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AP000553.6-201ENST00000641242 118 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.9□□□□□ -1.46
VPS8Q8N3P4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
VPS8Q8N3P4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
VPS8Q8N3P4 BX119904.1-201ENST00000432026 348 ntBASIC5.9□□□□□ -1.47
VPS8Q8N3P4 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.9□□□□□ -1.47
VPS8Q8N3P4 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.9□□□□□ -1.47
VPS8Q8N3P4 AC108941.1-201ENST00000502853 530 ntBASIC5.9□□□□□ -1.47
VPS8Q8N3P4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VPS8Q8N3P4 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.9□□□□□ -1.47
VPS8Q8N3P4 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.9□□□□□ -1.47
VPS8Q8N3P4 CCNG2P1-201ENST00000549521 1000 ntBASIC5.9□□□□□ -1.47
VPS8Q8N3P4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.9□□□□□ -1.47
VPS8Q8N3P4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
VPS8Q8N3P4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.9□□□□□ -1.47
VPS8Q8N3P4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
VPS8Q8N3P4 AC068254.2-201ENST00000623938 3577 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS8Q8N3P4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
VPS8Q8N3P4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS8Q8N3P4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS8Q8N3P4 HLFP1-201ENST00000402375 499 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 AL590704.1-201ENST00000402856 794 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 OR5AW1P-201ENST00000426334 1006 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 RPSAP41-201ENST00000439695 860 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 AC010469.1-201ENST00000463864 576 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 AC022034.3-201ENST00000471393 478 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS8Q8N3P4 HNRNPKP5-201ENST00000515300 253 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.89□□□□□ -1.47
VPS8Q8N3P4 AP003392.5-201ENST00000607857 415 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 AC233309.1-201ENST00000619522 751 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 OR5AC4P-202ENST00000642086 985 ntBASIC5.89□□□□□ -1.47
VPS8Q8N3P4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.89□□□□□ -1.47
VPS8Q8N3P4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
VPS8Q8N3P4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS8Q8N3P4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS8Q8N3P4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
VPS8Q8N3P4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
VPS8Q8N3P4 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.88□□□□□ -1.47
VPS8Q8N3P4 AC006511.1-201ENST00000470614 315 ntBASIC5.88□□□□□ -1.47
VPS8Q8N3P4 RNU1-95P-201ENST00000516357 160 ntBASIC5.88□□□□□ -1.47
VPS8Q8N3P4 RNU1-128P-201ENST00000516704 160 ntBASIC5.88□□□□□ -1.47
VPS8Q8N3P4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.88□□□□□ -1.47
VPS8Q8N3P4 CASC19-284ENST00000642142 1868 ntBASIC5.88□□□□□ -1.47
VPS8Q8N3P4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
VPS8Q8N3P4 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.88□□□□□ -1.47
VPS8Q8N3P4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
VPS8Q8N3P4 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 RNA5SP424-201ENST00000390988 115 ntBASIC5.87□□□□□ -1.47
VPS8Q8N3P4 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 NANOGP6-201ENST00000429190 847 ntBASIC5.87□□□□□ -1.47
VPS8Q8N3P4 AC073587.1-201ENST00000447093 876 ntBASIC5.87□□□□□ -1.47
VPS8Q8N3P4 TRBV12-2-201ENST00000489763 344 ntBASIC5.87□□□□□ -1.47
VPS8Q8N3P4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 AL583832.1-201ENST00000603227 784 ntBASIC5.87□□□□□ -1.47
VPS8Q8N3P4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 AL049781.1-201ENST00000623195 3585 ntBASIC5.87□□□□□ -1.47
VPS8Q8N3P4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS8Q8N3P4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
VPS8Q8N3P4 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS8Q8N3P4 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.86□□□□□ -1.47
VPS8Q8N3P4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS8Q8N3P4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS8Q8N3P4 RPS3AP25-201ENST00000411660 793 ntBASIC5.86□□□□□ -1.47
VPS8Q8N3P4 AC010740.1-201ENST00000417035 684 ntBASIC5.86□□□□□ -1.47
VPS8Q8N3P4 AL691447.1-201ENST00000419456 387 ntBASIC5.86□□□□□ -1.47
VPS8Q8N3P4 AL391219.1-201ENST00000422570 483 ntBASIC5.86□□□□□ -1.47
VPS8Q8N3P4 AC091286.1-201ENST00000431233 461 ntBASIC5.86□□□□□ -1.47
VPS8Q8N3P4 AC092809.1-201ENST00000441469 474 ntBASIC5.86□□□□□ -1.47
VPS8Q8N3P4 RANP9-201ENST00000519957 271 ntBASIC5.86□□□□□ -1.47
VPS8Q8N3P4 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS8Q8N3P4 AC008011.1-201ENST00000545989 227 ntBASIC5.86□□□□□ -1.47
VPS8Q8N3P4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS8Q8N3P4 AL391497.1-201ENST00000608671 547 ntBASIC5.86□□□□□ -1.47
VPS8Q8N3P4 AC119674.1-207ENST00000641355 633 ntBASIC5.86□□□□□ -1.47
VPS8Q8N3P4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS8Q8N3P4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS8Q8N3P4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS8Q8N3P4 SETP15-201ENST00000412724 337 ntBASIC5.85□□□□□ -1.47
VPS8Q8N3P4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS8Q8N3P4 AL451062.2-201ENST00000427515 271 ntBASIC5.85□□□□□ -1.47
VPS8Q8N3P4 CYCSP43-201ENST00000438233 310 ntBASIC5.85□□□□□ -1.47
VPS8Q8N3P4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS8Q8N3P4 AC098824.1-201ENST00000453565 980 ntBASIC5.85□□□□□ -1.47
VPS8Q8N3P4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.85□□□□□ -1.47
VPS8Q8N3P4 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS8Q8N3P4 AC005972.3-201ENST00000606304 481 ntBASIC5.85□□□□□ -1.47
VPS8Q8N3P4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS8Q8N3P4 AC074276.2-201ENST00000619891 348 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms