Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 HMGB3P6-201ENST00000444896 598 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 PPIAP21-201ENST00000464473 501 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 CCDC75P1-201ENST00000469247 791 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC091860.1-201ENST00000505723 432 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC112673.1-201ENST00000513168 575 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 DEFB130C-202ENST00000530001 230 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC018552.3-201ENST00000567416 561 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 MIR4660-201ENST00000583549 74 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AL035411.2-201ENST00000604022 421 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC002487.1-201ENST00000604565 994 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 VN1R74P-201ENST00000613259 503 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC079395.3-201ENST00000615161 484 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 AL121895.2-201ENST00000619558 447 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC109454.4-201ENST00000623411 649 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC090897.3-201ENST00000636973 1157 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SCN4BQ8IWT1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC111188.2-201ENST00000529697 1387 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SCN4BQ8IWT1 AC005332.5-201ENST00000591222 2919 ntBASIC5□□□□□ -1.61
SCN4BQ8IWT1 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 RNA5SP332-201ENST00000391063 115 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AL590290.1-201ENST00000405336 380 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC016397.1-201ENST00000412463 242 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC009965.2-201ENST00000425328 970 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 NPM1P24-201ENST00000428039 894 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 CETN4P-201ENST00000432407 469 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 ARL2BPP10-201ENST00000446487 531 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 TRBV8-2-201ENST00000475637 270 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC111000.3-201ENST00000508057 576 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC138832.1-201ENST00000522871 556 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC010503.3-201ENST00000594355 540 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 EIF1P6-201ENST00000600054 334 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC011330.2-201ENST00000621680 635 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 AC116563.2-201ENST00000624751 535 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 Z98755.1-201ENST00000407015 1384 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 MTCO1P6-201ENST00000481192 1384 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 TCP11X1-202ENST00000622971 1372 ntBASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SCN4BQ8IWT1 PHKBP1-201ENST00000450951 1951 ntBASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 RN7SKP74-201ENST00000362849 309 ntBASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 RNU4-44P-201ENST00000363050 141 ntBASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 BMS1P3-201ENST00000372011 932 ntBASIC4.98□□□□□ -1.61
SCN4BQ8IWT1 AL049697.2-201ENST00000403708 294 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms