Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RPP40P2-201ENST00000603596 712 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AC100847.1-201ENST00000611316 481 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AL022401.1-201ENST00000619498 108 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 PHKBP1-201ENST00000450951 1951 ntBASIC5.21□□□□□ -1.58
HERC6Q8IVU3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HERC6Q8IVU3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 SAMMSON-213ENST00000641336 1521 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 SNORA37-201ENST00000384504 129 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 RNU6-603P-201ENST00000411403 107 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 TAF13P2-201ENST00000416876 286 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 RPS27AP12-201ENST00000429552 465 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 PTGES3P1-201ENST00000439531 483 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 CBX1P1-201ENST00000440184 427 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 YWHAQP9-201ENST00000445891 512 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AL591363.1-201ENST00000450091 483 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC091959.2-201ENST00000477363 321 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC108729.1-201ENST00000487812 947 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 RN7SKP283-201ENST00000517197 270 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AL049839.1-201ENST00000556151 657 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 MTCYBP23-201ENST00000558717 1102 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 MTND1P8-201ENST00000571424 950 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 RN7SL802P-201ENST00000577858 299 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC115085.1-201ENST00000588924 229 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AP001542.2-201ENST00000593141 364 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 BNIP3P22-201ENST00000593399 556 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC067959.1-201ENST00000604334 379 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC034229.4-201ENST00000607861 441 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC108359.1-201ENST00000616451 1211 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 CYCSP41-201ENST00000616920 296 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AL035461.2-201ENST00000619201 524 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AL049536.1-201ENST00000625043 744 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC134882.1-201ENST00000603738 1676 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AL731532.2-201ENST00000623542 1953 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AL442639.1-201ENST00000625030 1899 ntBASIC5.2□□□□□ -1.58
HERC6Q8IVU3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.2□□□□□ -1.58
HERC6Q8IVU3 AC004817.4-201ENST00000602396 3625 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 IQCB2P-201ENST00000401788 1633 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AL731566.1-201ENST00000620490 1937 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 MIR23B-201ENST00000384832 97 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 Y_RNA.578-201ENST00000390903 88 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 OR6C69P-201ENST00000394268 893 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 MTCO2P23-201ENST00000425216 680 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 RPL21P110-201ENST00000433345 446 ntBASIC5.19□□□□□ -1.58
HERC6Q8IVU3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.19□□□□□ -1.58
HERC6Q8IVU3 AC092809.1-201ENST00000441469 474 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms