Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL121834.1-202ENST00000404494 277 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 CBX1P3-201ENST00000413296 527 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 AC069285.2-201ENST00000440210 275 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 RPS17P13-201ENST00000448974 407 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 RPS26P15-201ENST00000488067 348 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 HNRNPKP5-201ENST00000515300 253 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 AC008802.1-201ENST00000519121 791 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 AC107982.3-201ENST00000584957 985 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 OR1AB1P-201ENST00000585564 761 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 AC074276.2-201ENST00000619891 348 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 AC004777.1-201ENST00000624317 287 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 LINC01109-201ENST00000603837 3081 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 UBE3AP2-201ENST00000429033 2259 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
RFX7Q2KHR2 IPO8P1-201ENST00000455509 3109 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 AC093775.1-201ENST00000624154 1868 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 AC005332.5-201ENST00000591222 2919 ntBASIC4.79□□□□□ -1.64
RFX7Q2KHR2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AL672167.2-201ENST00000377164 879 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 SETP10-201ENST00000424368 814 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 HMGB1P37-201ENST00000439613 609 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AC007688.1-201ENST00000475592 759 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AP000255.1-201ENST00000610276 676 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 BDP1P-201ENST00000582658 1990 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 RPL7AP73-201ENST00000413490 353 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 OR51A6P-201ENST00000418680 1004 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 NANOGP6-201ENST00000429190 847 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 RPL37P1-201ENST00000432310 284 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 ATP5HP2-201ENST00000433885 485 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 VN1R25P-201ENST00000443385 738 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 VN1R40P-201ENST00000455196 941 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 SCARNA14-201ENST00000516903 136 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 CCNG2P1-201ENST00000549521 1000 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 GTF2IP22-201ENST00000554443 182 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 SULT1C2P2-201ENST00000562517 294 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AL133247.2-201ENST00000603236 482 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AL137072.1-201ENST00000603444 466 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AC233309.1-201ENST00000619522 751 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 AC067931.1-201ENST00000624190 671 ntBASIC4.78□□□□□ -1.64
RFX7Q2KHR2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 CDY11P-201ENST00000447168 1651 ntBASIC4.77□□□□□ -1.65
RFX7Q2KHR2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 AC106871.1-201ENST00000568324 3102 ntBASIC4.77□□□□□ -1.65
RFX7Q2KHR2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 PTMAP2-201ENST00000397627 327 ntBASIC4.77□□□□□ -1.65
RFX7Q2KHR2 RPS3AP25-201ENST00000411660 793 ntBASIC4.77□□□□□ -1.65
RFX7Q2KHR2 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 AC096638.2-201ENST00000434965 711 ntBASIC4.77□□□□□ -1.65
RFX7Q2KHR2 RPSAP41-201ENST00000439695 860 ntBASIC4.77□□□□□ -1.65
RFX7Q2KHR2 RPL6P5-201ENST00000445678 828 ntBASIC4.77□□□□□ -1.65
RFX7Q2KHR2 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.77□□□□□ -1.65
RFX7Q2KHR2 OR9M1P-201ENST00000459641 921 ntBASIC4.77□□□□□ -1.65
RFX7Q2KHR2 RPS20P21-201ENST00000466859 343 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms