Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LTBQ06643 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LTBQ06643 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.54□□□□□ -1.68
LTBQ06643 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LTBQ06643 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.54□□□□□ -1.68
LTBQ06643 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.54□□□□□ -1.68
LTBQ06643 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
LTBQ06643 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LTBQ06643 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.54□□□□□ -1.68
LTBQ06643 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.54□□□□□ -1.68
LTBQ06643 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LTBQ06643 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LTBQ06643 AP001642.1-201ENST00000624727 2117 ntBASIC4.54□□□□□ -1.68
LTBQ06643 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.54□□□□□ -1.68
LTBQ06643 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.54□□□□□ -1.68
LTBQ06643 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LTBQ06643 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.53□□□□□ -1.68
LTBQ06643 MTND4P4-201ENST00000439033 1366 ntBASIC4.53□□□□□ -1.68
LTBQ06643 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.53□□□□□ -1.68
LTBQ06643 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.53□□□□□ -1.68
LTBQ06643 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.53□□□□□ -1.68
LTBQ06643 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 Y_RNA.126-201ENST00000363382 111 ntBASIC4.53□□□□□ -1.68
LTBQ06643 SNORD116.1-201ENST00000365628 92 ntBASIC4.53□□□□□ -1.68
LTBQ06643 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LTBQ06643 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 Y_RNA.505-201ENST00000384489 102 ntBASIC4.53□□□□□ -1.68
LTBQ06643 SNORD65C-201ENST00000390962 71 ntBASIC4.53□□□□□ -1.68
LTBQ06643 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.53□□□□□ -1.68
LTBQ06643 AC019050.1-201ENST00000418508 492 ntBASIC4.53□□□□□ -1.68
LTBQ06643 TIMM9P2-201ENST00000419324 266 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.53□□□□□ -1.68
LTBQ06643 AC011233.1-201ENST00000422812 283 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AC009480.2-201ENST00000422916 432 ntBASIC4.53□□□□□ -1.68
LTBQ06643 GTF2IP2-201ENST00000424290 697 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.53□□□□□ -1.68
LTBQ06643 RPL34P6-201ENST00000432390 345 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AC092393.1-201ENST00000439625 742 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.53□□□□□ -1.68
LTBQ06643 CASP3P1-201ENST00000446037 609 ntBASIC4.53□□□□□ -1.68
LTBQ06643 KNOP1P3-201ENST00000446933 426 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AC104978.1-201ENST00000449387 391 ntBASIC4.53□□□□□ -1.68
LTBQ06643 TCEA1P1-201ENST00000449716 880 ntBASIC4.53□□□□□ -1.68
LTBQ06643 IGHV5-78-201ENST00000450948 295 ntBASIC4.53□□□□□ -1.68
LTBQ06643 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.53□□□□□ -1.68
LTBQ06643 MTND1P27-201ENST00000451117 902 ntBASIC4.53□□□□□ -1.68
LTBQ06643 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.53□□□□□ -1.68
LTBQ06643 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.53□□□□□ -1.68
LTBQ06643 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.53□□□□□ -1.68
LTBQ06643 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.53□□□□□ -1.68
LTBQ06643 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 RPL7P32-201ENST00000457119 744 ntBASIC4.53□□□□□ -1.68
LTBQ06643 RPS20P4-201ENST00000461659 355 ntBASIC4.53□□□□□ -1.68
LTBQ06643 RPL7P16-201ENST00000479738 738 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AC107398.1-201ENST00000486904 505 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.53□□□□□ -1.68
LTBQ06643 AC025459.1-201ENST00000504072 156 ntBASIC4.53□□□□□ -1.68
LTBQ06643 RN7SKP141-201ENST00000516167 338 ntBASIC4.53□□□□□ -1.68
LTBQ06643 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LTBQ06643 RPL23AP53-201ENST00000521854 457 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.53□□□□□ -1.68
LTBQ06643 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.53□□□□□ -1.68
LTBQ06643 AP003461.1-201ENST00000528866 78 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.53□□□□□ -1.68
LTBQ06643 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.53□□□□□ -1.68
LTBQ06643 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.53□□□□□ -1.68
LTBQ06643 AC135628.1-201ENST00000568867 534 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.53□□□□□ -1.68
LTBQ06643 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.53□□□□□ -1.68
LTBQ06643 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.53□□□□□ -1.68
LTBQ06643 AC105254.2-201ENST00000603636 436 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AP003392.5-201ENST00000607857 415 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AL450489.1-201ENST00000612071 468 ntBASIC4.53□□□□□ -1.68
LTBQ06643 AP003497.2-201ENST00000624220 967 ntBASIC4.53□□□□□ -1.68
LTBQ06643 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.53□□□□□ -1.68
LTBQ06643 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.53□□□□□ -1.68
LTBQ06643 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.53□□□□□ -1.68
LTBQ06643 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LTBQ06643 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.53□□□□□ -1.69
LTBQ06643 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
LTBQ06643 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.52□□□□□ -1.69
LTBQ06643 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.52□□□□□ -1.69
LTBQ06643 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
LTBQ06643 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LTBQ06643 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LTBQ06643 Y_RNA.201-201ENST00000364052 96 ntBASIC4.52□□□□□ -1.69
LTBQ06643 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 AC068538.1-201ENST00000376856 336 ntBASIC4.52□□□□□ -1.69
LTBQ06643 RNU6-1320P-201ENST00000390838 107 ntBASIC4.52□□□□□ -1.69
LTBQ06643 RNU6-1269P-201ENST00000391139 107 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms