Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.8□□□□□ -1.64
GABPAQ06546 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.8□□□□□ -1.64
GABPAQ06546 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.8□□□□□ -1.64
GABPAQ06546 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.8□□□□□ -1.64
GABPAQ06546 MIR6500-201ENST00000622700 86 ntBASIC4.8□□□□□ -1.64
GABPAQ06546 AP005264.7-201ENST00000625003 745 ntBASIC4.8□□□□□ -1.64
GABPAQ06546 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.8□□□□□ -1.64
GABPAQ06546 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
GABPAQ06546 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.8□□□□□ -1.64
GABPAQ06546 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.8□□□□□ -1.64
GABPAQ06546 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABPAQ06546 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
GABPAQ06546 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.79□□□□□ -1.64
GABPAQ06546 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABPAQ06546 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.79□□□□□ -1.64
GABPAQ06546 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABPAQ06546 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GABPAQ06546 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GABPAQ06546 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GABPAQ06546 RNU4-44P-201ENST00000363050 141 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GABPAQ06546 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABPAQ06546 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABPAQ06546 RPS23P10-201ENST00000416185 486 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.79□□□□□ -1.64
GABPAQ06546 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.79□□□□□ -1.64
GABPAQ06546 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.79□□□□□ -1.64
GABPAQ06546 RPS29P7-201ENST00000439662 171 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.79□□□□□ -1.64
GABPAQ06546 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.79□□□□□ -1.64
GABPAQ06546 RPS11P1-201ENST00000451072 473 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 AC021087.2-201ENST00000504656 1203 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.79□□□□□ -1.64
GABPAQ06546 NPM1P41-201ENST00000512920 831 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.79□□□□□ -1.64
GABPAQ06546 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.79□□□□□ -1.64
GABPAQ06546 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.79□□□□□ -1.64
GABPAQ06546 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.79□□□□□ -1.64
GABPAQ06546 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.79□□□□□ -1.64
GABPAQ06546 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.79□□□□□ -1.64
GABPAQ06546 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
GABPAQ06546 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABPAQ06546 YPEL5P3-201ENST00000547227 352 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.79□□□□□ -1.64
GABPAQ06546 AC087888.1-201ENST00000550884 1254 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.79□□□□□ -1.64
GABPAQ06546 AC007599.1-201ENST00000568688 1174 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 AL133247.2-201ENST00000603236 482 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 AL451086.1-201ENST00000605596 223 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 AC023509.5-201ENST00000617434 807 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 AC079298.2-201ENST00000623885 459 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 OR5AC4P-202ENST00000642086 985 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
GABPAQ06546 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GABPAQ06546 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
GABPAQ06546 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
GABPAQ06546 DDX6P1-205ENST00000441966 1436 ntBASIC4.79□□□□□ -1.64
GABPAQ06546 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.79□□□□□ -1.64
GABPAQ06546 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GABPAQ06546 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.79□□□□□ -1.64
GABPAQ06546 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GABPAQ06546 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.78□□□□□ -1.64
GABPAQ06546 AL122126.1-201ENST00000546905 1318 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABPAQ06546 FAM91A3P-201ENST00000456826 2544 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GABPAQ06546 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
GABPAQ06546 Z95327.2-201ENST00000414579 1873 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.78□□□□□ -1.64
GABPAQ06546 RNU4-7P-201ENST00000364758 141 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABPAQ06546 TCEA1P4-201ENST00000415066 844 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 BTF3P9-201ENST00000418784 283 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 MTND4LP7-201ENST00000431728 294 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AC093716.1-201ENST00000435923 377 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.78□□□□□ -1.64
GABPAQ06546 AL589765.3-201ENST00000446084 462 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AL627224.1-201ENST00000448334 444 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.78□□□□□ -1.64
GABPAQ06546 RN7SL542P-201ENST00000467147 294 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AC090543.1-201ENST00000492168 485 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 IGLV3-26-201ENST00000520756 302 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AC018442.3-201ENST00000523025 183 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AC087272.1-201ENST00000523624 533 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 MED28P5-201ENST00000528254 438 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.78□□□□□ -1.64
GABPAQ06546 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.78□□□□□ -1.64
GABPAQ06546 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.78□□□□□ -1.64
GABPAQ06546 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.78□□□□□ -1.64
GABPAQ06546 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.78□□□□□ -1.64
GABPAQ06546 RPL23AP87-202ENST00000573039 466 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AC233702.9-201ENST00000581528 203 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.78□□□□□ -1.64
GABPAQ06546 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.78□□□□□ -1.64
GABPAQ06546 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.78□□□□□ -1.64
GABPAQ06546 MTCO2P22-201ENST00000603246 681 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AL606490.9-201ENST00000603331 271 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 AP003499.2-201ENST00000624100 483 ntBASIC4.78□□□□□ -1.64
GABPAQ06546 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms