Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCL20P78556 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCL20P78556 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCL20P78556 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCL20P78556 AC015813.6-201ENST00000624409 5808 ntBASIC3.07□□□□□ -1.92
CCL20P78556 AC116667.1-201ENST00000604855 2072 ntBASIC3.07□□□□□ -1.92
CCL20P78556 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCL20P78556 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CCL20P78556 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCL20P78556 RPL31P52-201ENST00000407532 367 ntBASIC3.07□□□□□ -1.92
CCL20P78556 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCL20P78556 UQCRBP1-201ENST00000421129 336 ntBASIC3.07□□□□□ -1.92
CCL20P78556 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.07□□□□□ -1.92
CCL20P78556 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.07□□□□□ -1.92
CCL20P78556 MOB1AP1-201ENST00000430903 535 ntBASIC3.07□□□□□ -1.92
CCL20P78556 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.07□□□□□ -1.92
CCL20P78556 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.07□□□□□ -1.92
CCL20P78556 AC098824.1-201ENST00000453565 980 ntBASIC3.07□□□□□ -1.92
CCL20P78556 AC091685.2-201ENST00000454924 864 ntBASIC3.07□□□□□ -1.92
CCL20P78556 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.07□□□□□ -1.92
CCL20P78556 AC005532.2-201ENST00000467154 373 ntBASIC3.07□□□□□ -1.92
CCL20P78556 RPL23AP14-201ENST00000468281 468 ntBASIC3.07□□□□□ -1.92
CCL20P78556 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.07□□□□□ -1.92
CCL20P78556 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.07□□□□□ -1.92
CCL20P78556 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.07□□□□□ -1.92
CCL20P78556 PCBP2P3-201ENST00000509726 843 ntBASIC3.07□□□□□ -1.92
CCL20P78556 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.07□□□□□ -1.92
CCL20P78556 OR5AP1P-201ENST00000529730 940 ntBASIC3.07□□□□□ -1.92
CCL20P78556 AC105233.3-201ENST00000531125 744 ntBASIC3.07□□□□□ -1.92
CCL20P78556 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.07□□□□□ -1.92
CCL20P78556 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.07□□□□□ -1.92
CCL20P78556 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.07□□□□□ -1.92
CCL20P78556 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
CCL20P78556 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.07□□□□□ -1.92
CCL20P78556 MIR4512-201ENST00000583257 77 ntBASIC3.07□□□□□ -1.92
CCL20P78556 BMS1P7-201ENST00000602440 1052 ntBASIC3.07□□□□□ -1.92
CCL20P78556 FAM27D1-201ENST00000612308 341 ntBASIC3.07□□□□□ -1.92
CCL20P78556 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.07□□□□□ -1.92
CCL20P78556 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
CCL20P78556 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.07□□□□□ -1.92
CCL20P78556 OR5AC4P-202ENST00000642086 985 ntBASIC3.07□□□□□ -1.92
CCL20P78556 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCL20P78556 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCL20P78556 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.07□□□□□ -1.92
CCL20P78556 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCL20P78556 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCL20P78556 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.07□□□□□ -1.92
CCL20P78556 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.07□□□□□ -1.92
CCL20P78556 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CCL20P78556 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCL20P78556 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCL20P78556 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCL20P78556 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.06□□□□□ -1.92
CCL20P78556 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCL20P78556 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCL20P78556 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCL20P78556 SNORD113.2-201ENST00000364166 89 ntBASIC3.06□□□□□ -1.92
CCL20P78556 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCL20P78556 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCL20P78556 AL590763.1-201ENST00000398297 1545 ntBASIC3.06□□□□□ -1.92
CCL20P78556 RPL23AP59-201ENST00000399415 461 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AL391361.1-201ENST00000405580 489 ntBASIC3.06□□□□□ -1.92
CCL20P78556 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCL20P78556 SNORA57.3-201ENST00000411095 141 ntBASIC3.06□□□□□ -1.92
CCL20P78556 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.06□□□□□ -1.92
CCL20P78556 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC3.06□□□□□ -1.92
CCL20P78556 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.06□□□□□ -1.92
CCL20P78556 RAD17P1-201ENST00000418130 2042 ntBASIC3.06□□□□□ -1.92
CCL20P78556 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCL20P78556 NPM1P24-201ENST00000428039 894 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC3.06□□□□□ -1.92
CCL20P78556 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.06□□□□□ -1.92
CCL20P78556 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.06□□□□□ -1.92
CCL20P78556 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.06□□□□□ -1.92
CCL20P78556 TXNP1-201ENST00000441872 371 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC245517.2-201ENST00000442890 346 ntBASIC3.06□□□□□ -1.92
CCL20P78556 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCL20P78556 EEF1B2P5-201ENST00000444820 548 ntBASIC3.06□□□□□ -1.92
CCL20P78556 HMGB3P8-201ENST00000449709 577 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.06□□□□□ -1.92
CCL20P78556 RNU7-170P-201ENST00000459303 61 ntBASIC3.06□□□□□ -1.92
CCL20P78556 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.06□□□□□ -1.92
CCL20P78556 AC010683.1-201ENST00000473673 378 ntBASIC3.06□□□□□ -1.92
CCL20P78556 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCL20P78556 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC3.06□□□□□ -1.92
CCL20P78556 RNA5SP49-201ENST00000516450 115 ntBASIC3.06□□□□□ -1.92
CCL20P78556 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.06□□□□□ -1.92
CCL20P78556 AC008489.1-201ENST00000524271 483 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC007424.1-203ENST00000554613 687 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.06□□□□□ -1.92
CCL20P78556 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.06□□□□□ -1.92
CCL20P78556 MIR3934-201ENST00000579806 107 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.06□□□□□ -1.92
CCL20P78556 MIR5684-201ENST00000585074 65 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC090229.1-201ENST00000590983 1609 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AL158163.1-201ENST00000603915 1649 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC115286.1-201ENST00000604298 434 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC017002.4-201ENST00000604721 1525 ntBASIC3.06□□□□□ -1.92
CCL20P78556 AC010857.1-201ENST00000606398 594 ntBASIC3.06□□□□□ -1.92
CCL20P78556 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms