Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.52□□□□□ -1.85
AP3S2P59780 AC023141.12-201ENST00000512399 199 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 AC021006.3-201ENST00000530771 192 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC3.52□□□□□ -1.85
AP3S2P59780 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 AC092747.2-201ENST00000545069 983 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.52□□□□□ -1.85
AP3S2P59780 ZNF192P1-203ENST00000565888 810 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 AC069366.1-201ENST00000583159 838 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.52□□□□□ -1.85
AP3S2P59780 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.52□□□□□ -1.85
AP3S2P59780 AP001160.4-201ENST00000596971 382 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 Z82195.1-201ENST00000604558 398 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 AC105429.2-201ENST00000610567 517 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.52□□□□□ -1.85
AP3S2P59780 AL121612.2-201ENST00000612261 482 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 U7.8-201ENST00000619968 63 ntBASIC3.52□□□□□ -1.85
AP3S2P59780 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
AP3S2P59780 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
AP3S2P59780 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP3S2P59780 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP3S2P59780 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.51□□□□□ -1.85
AP3S2P59780 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.51□□□□□ -1.85
AP3S2P59780 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
AP3S2P59780 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
AP3S2P59780 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC3.51□□□□□ -1.85
AP3S2P59780 RNA5SP191-201ENST00000362585 102 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP3S2P59780 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.51□□□□□ -1.85
AP3S2P59780 RNU6-532P-201ENST00000384318 107 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 CCNB2P1-201ENST00000399411 1150 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.51□□□□□ -1.85
AP3S2P59780 ARF4P2-201ENST00000430209 526 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.51□□□□□ -1.85
AP3S2P59780 RPS26P40-201ENST00000435209 294 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.51□□□□□ -1.85
AP3S2P59780 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.51□□□□□ -1.85
AP3S2P59780 ACTR3P2-201ENST00000439585 1257 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 MTCYBP21-201ENST00000443300 1113 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 RPS20P32-201ENST00000456044 356 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.51□□□□□ -1.85
AP3S2P59780 COPS8P2-201ENST00000473228 627 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 AL049830.2-201ENST00000480072 201 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 RPS23P1-201ENST00000491662 432 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.51□□□□□ -1.85
AP3S2P59780 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.51□□□□□ -1.85
AP3S2P59780 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.51□□□□□ -1.85
AP3S2P59780 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP3S2P59780 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.51□□□□□ -1.85
AP3S2P59780 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.51□□□□□ -1.85
AP3S2P59780 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.51□□□□□ -1.85
AP3S2P59780 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.51□□□□□ -1.85
AP3S2P59780 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.51□□□□□ -1.85
AP3S2P59780 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.51□□□□□ -1.85
AP3S2P59780 AL359742.1-201ENST00000622497 540 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.51□□□□□ -1.85
AP3S2P59780 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.51□□□□□ -1.85
AP3S2P59780 AL049767.1-202ENST00000637826 242 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 AC119674.1-212ENST00000641155 993 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 INTS6P1-201ENST00000504674 2530 ntBASIC3.51□□□□□ -1.85
AP3S2P59780 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
AP3S2P59780 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
AP3S2P59780 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
AP3S2P59780 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.51□□□□□ -1.85
AP3S2P59780 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC3.51□□□□□ -1.85
AP3S2P59780 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
AP3S2P59780 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
AP3S2P59780 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
AP3S2P59780 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
AP3S2P59780 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
AP3S2P59780 SDAD1P1-202ENST00000524156 2051 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
AP3S2P59780 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.5□□□□□ -1.85
AP3S2P59780 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
AP3S2P59780 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.5□□□□□ -1.85
AP3S2P59780 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
AP3S2P59780 FIG4-202ENST00000368941 791 ntTSL 3 BASIC3.5□□□□□ -1.85
AP3S2P59780 RNU1-106P-201ENST00000384382 164 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 MIR659-201ENST00000384963 97 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 RNA5SP397-201ENST00000391323 118 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
AP3S2P59780 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC3.5□□□□□ -1.85
AP3S2P59780 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
AP3S2P59780 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC3.5□□□□□ -1.85
AP3S2P59780 NFYAP1-201ENST00000431953 972 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.5□□□□□ -1.85
AP3S2P59780 RPS7P5-201ENST00000441482 581 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.5□□□□□ -1.85
AP3S2P59780 HMGN2P21-201ENST00000447764 270 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 PPIAP3-201ENST00000450588 505 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
AP3S2P59780 DHFRP3-201ENST00000455595 559 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 BX284632.1-201ENST00000478218 541 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 RPL29P14-201ENST00000495837 428 ntBASIC3.5□□□□□ -1.85
AP3S2P59780 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.5□□□□□ -1.85
AP3S2P59780 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.5□□□□□ -1.85
AP3S2P59780 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms