Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUMO3P55854 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.92□□□□□ -1.62
SUMO3P55854 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUMO3P55854 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.92□□□□□ -1.62
SUMO3P55854 MTND5P28-201ENST00000438005 1594 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.92□□□□□ -1.62
SUMO3P55854 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUMO3P55854 AL079343.1-201ENST00000572358 1771 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 MIR133B-201ENST00000362210 119 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 RNA5SP335-201ENST00000363817 110 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 RNA5SP132-201ENST00000364725 118 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 PEX12P1-201ENST00000400284 1048 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 RNU6-920P-201ENST00000410926 92 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AL133384.1-201ENST00000412744 351 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.92□□□□□ -1.62
SUMO3P55854 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC016907.1-201ENST00000419483 435 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC096632.1-201ENST00000427395 310 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AL121776.1-201ENST00000429337 372 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC012075.1-201ENST00000436549 580 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 MTND2P40-201ENST00000436718 841 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 SPRYD7P1-201ENST00000443861 570 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 GEMIN8P3-201ENST00000445417 720 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC016724.1-201ENST00000453215 421 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 MTCO3P16-201ENST00000454456 754 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 MTND2P28-201ENST00000457540 1044 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC022133.1-201ENST00000490961 571 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 OR4G11P-201ENST00000492842 939 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 RPS6P4-201ENST00000494693 758 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.92□□□□□ -1.62
SUMO3P55854 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.92□□□□□ -1.62
SUMO3P55854 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.92□□□□□ -1.62
SUMO3P55854 HMGB1P40-201ENST00000525121 540 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SUMO3P55854 BLZF2P-201ENST00000553776 1130 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC012146.2-201ENST00000576545 416 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.92□□□□□ -1.62
SUMO3P55854 MIR4512-201ENST00000583257 77 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC020914.6-201ENST00000594327 272 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC244107.2-201ENST00000611773 76 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC108359.1-201ENST00000616451 1211 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 Z69908.1-201ENST00000622603 247 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC135068.5-201ENST00000624197 983 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC099063.3-201ENST00000642066 185 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUMO3P55854 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUMO3P55854 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUMO3P55854 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SUMO3P55854 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.92□□□□□ -1.62
SUMO3P55854 CR381670.1-201ENST00000624291 1693 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.92□□□□□ -1.62
SUMO3P55854 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SUMO3P55854 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
SUMO3P55854 AC114546.3-201ENST00000623582 1734 ntBASIC4.92□□□□□ -1.62
SUMO3P55854 OR9K1P-202ENST00000641111 3217 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SUMO3P55854 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SUMO3P55854 MTND5P24-201ENST00000438892 1767 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
SUMO3P55854 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
SUMO3P55854 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SUMO3P55854 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SUMO3P55854 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.91□□□□□ -1.62
SUMO3P55854 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SUMO3P55854 Y_RNA.77-201ENST00000362962 107 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 RNU6-984P-201ENST00000363236 109 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 RNA5SP242-201ENST00000364171 118 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 RNU6-657P-201ENST00000383904 107 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SUMO3P55854 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SUMO3P55854 SNORA11.3-201ENST00000408471 128 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SUMO3P55854 RNA5SP296-201ENST00000410523 111 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 CEACAMP8-201ENST00000413902 580 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 RPL23AP39-201ENST00000415533 405 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.91□□□□□ -1.62
SUMO3P55854 AL513325.1-201ENST00000417716 1034 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 Z99497.1-201ENST00000421282 135 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AC073335.1-201ENST00000427776 363 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.91□□□□□ -1.62
SUMO3P55854 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.91□□□□□ -1.62
SUMO3P55854 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.91□□□□□ -1.62
SUMO3P55854 AC092427.1-201ENST00000439177 601 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 RPL23AP16-201ENST00000441715 421 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.91□□□□□ -1.62
SUMO3P55854 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.91□□□□□ -1.62
SUMO3P55854 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.91□□□□□ -1.62
SUMO3P55854 APOOP2-201ENST00000461561 539 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms