Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MLECP1-201ENST00000615893 709 ntBASIC3.99□□□□□ -1.77
LIM2P55344 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.99□□□□□ -1.77
LIM2P55344 AC090617.9-201ENST00000623751 147 ntBASIC3.99□□□□□ -1.77
LIM2P55344 AL356094.1-201ENST00000624663 1212 ntBASIC3.99□□□□□ -1.77
LIM2P55344 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.99□□□□□ -1.77
LIM2P55344 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIM2P55344 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIM2P55344 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LIM2P55344 AC093311.1-201ENST00000506586 2021 ntBASIC3.99□□□□□ -1.77
LIM2P55344 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.98□□□□□ -1.77
LIM2P55344 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
LIM2P55344 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.98□□□□□ -1.77
LIM2P55344 MIR383-201ENST00000362257 73 ntBASIC3.98□□□□□ -1.77
LIM2P55344 RNA5SP443-201ENST00000363083 132 ntBASIC3.98□□□□□ -1.77
LIM2P55344 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 RN7SKP182-201ENST00000410772 298 ntBASIC3.98□□□□□ -1.77
LIM2P55344 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.98□□□□□ -1.77
LIM2P55344 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.98□□□□□ -1.77
LIM2P55344 BTF3P10-201ENST00000433415 495 ntBASIC3.98□□□□□ -1.77
LIM2P55344 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.98□□□□□ -1.77
LIM2P55344 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.98□□□□□ -1.77
LIM2P55344 RPL34P26-201ENST00000445636 354 ntBASIC3.98□□□□□ -1.77
LIM2P55344 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.98□□□□□ -1.77
LIM2P55344 CLIC4P1-201ENST00000453177 535 ntBASIC3.98□□□□□ -1.77
LIM2P55344 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.98□□□□□ -1.77
LIM2P55344 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 NPM1P17-201ENST00000479221 602 ntBASIC3.98□□□□□ -1.77
LIM2P55344 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.98□□□□□ -1.77
LIM2P55344 AC105137.1-201ENST00000484355 562 ntBASIC3.98□□□□□ -1.77
LIM2P55344 AC010627.1-201ENST00000503819 1294 ntBASIC3.98□□□□□ -1.77
LIM2P55344 AC108471.1-201ENST00000513977 287 ntBASIC3.98□□□□□ -1.77
LIM2P55344 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.98□□□□□ -1.77
LIM2P55344 HIGD1AP18-201ENST00000520730 278 ntBASIC3.98□□□□□ -1.77
LIM2P55344 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.98□□□□□ -1.77
LIM2P55344 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.98□□□□□ -1.77
LIM2P55344 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.98□□□□□ -1.77
LIM2P55344 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.98□□□□□ -1.77
LIM2P55344 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 AL390334.1-201ENST00000556395 450 ntBASIC3.98□□□□□ -1.77
LIM2P55344 AL109741.3-201ENST00000561748 592 ntBASIC3.98□□□□□ -1.77
LIM2P55344 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.98□□□□□ -1.77
LIM2P55344 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.98□□□□□ -1.77
LIM2P55344 AC023575.1-201ENST00000580510 358 ntBASIC3.98□□□□□ -1.77
LIM2P55344 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.98□□□□□ -1.77
LIM2P55344 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.98□□□□□ -1.77
LIM2P55344 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.98□□□□□ -1.77
LIM2P55344 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.98□□□□□ -1.77
LIM2P55344 AL671309.1-201ENST00000603750 544 ntBASIC3.98□□□□□ -1.77
LIM2P55344 SUMO2P14-201ENST00000604488 293 ntBASIC3.98□□□□□ -1.77
LIM2P55344 ARF4P1-201ENST00000605447 541 ntBASIC3.98□□□□□ -1.77
LIM2P55344 AC005962.2-201ENST00000611427 652 ntBASIC3.98□□□□□ -1.77
LIM2P55344 MIR378J-201ENST00000611988 109 ntBASIC3.98□□□□□ -1.77
LIM2P55344 MIR6758-201ENST00000620653 63 ntBASIC3.98□□□□□ -1.77
LIM2P55344 AC138907.10-201ENST00000623708 983 ntBASIC3.98□□□□□ -1.77
LIM2P55344 AC024023.1-201ENST00000624530 922 ntBASIC3.98□□□□□ -1.77
LIM2P55344 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC3.98□□□□□ -1.77
LIM2P55344 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.98□□□□□ -1.77
LIM2P55344 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.98□□□□□ -1.77
LIM2P55344 AC027290.2-201ENST00000623210 18662 ntBASIC3.98□□□□□ -1.77
LIM2P55344 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.98□□□□□ -1.77
LIM2P55344 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LIM2P55344 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.98□□□□□ -1.77
LIM2P55344 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LIM2P55344 AL133243.3-201ENST00000617415 3004 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC009313.2-201ENST00000417893 1941 ntBASIC3.97□□□□□ -1.77
LIM2P55344 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LIM2P55344 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
LIM2P55344 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIM2P55344 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LIM2P55344 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.97□□□□□ -1.77
LIM2P55344 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LIM2P55344 MIR448-201ENST00000362131 111 ntBASIC3.97□□□□□ -1.77
LIM2P55344 RNA5SP388-201ENST00000362584 119 ntBASIC3.97□□□□□ -1.77
LIM2P55344 SNORD74.4-201ENST00000364129 80 ntBASIC3.97□□□□□ -1.77
LIM2P55344 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LIM2P55344 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LIM2P55344 AL356057.1-202ENST00000402263 756 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AL121834.1-202ENST00000404494 277 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.97□□□□□ -1.77
LIM2P55344 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.97□□□□□ -1.77
LIM2P55344 AC099336.2-201ENST00000422457 254 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.97□□□□□ -1.77
LIM2P55344 COX6B1P7-201ENST00000430845 235 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LIM2P55344 MTCO1P52-201ENST00000433928 531 ntBASIC3.97□□□□□ -1.77
LIM2P55344 RPL23AP46-201ENST00000438548 490 ntBASIC3.97□□□□□ -1.77
LIM2P55344 RPL23AP89-201ENST00000439324 255 ntBASIC3.97□□□□□ -1.77
LIM2P55344 AL589765.3-201ENST00000446084 462 ntBASIC3.97□□□□□ -1.77
LIM2P55344 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms