Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 EIF4EP1-201ENST00000422311 642 ntBASIC4.7□□□□□ -1.66
NUP98P52948 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP98P52948 KCTD9P3-201ENST00000434597 1169 ntBASIC4.7□□□□□ -1.66
NUP98P52948 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.7□□□□□ -1.66
NUP98P52948 AL645931.1-201ENST00000439737 410 ntBASIC4.7□□□□□ -1.66
NUP98P52948 RPS4XP10-201ENST00000465034 731 ntBASIC4.7□□□□□ -1.66
NUP98P52948 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.7□□□□□ -1.66
NUP98P52948 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.7□□□□□ -1.66
NUP98P52948 AL159169.3-201ENST00000608871 561 ntBASIC4.7□□□□□ -1.66
NUP98P52948 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP98P52948 AC063952.1-203ENST00000634410 658 ntBASIC4.7□□□□□ -1.66
NUP98P52948 AC055839.1-201ENST00000634467 498 ntBASIC4.7□□□□□ -1.66
NUP98P52948 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.7□□□□□ -1.66
NUP98P52948 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP98P52948 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP98P52948 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP98P52948 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
NUP98P52948 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.7□□□□□ -1.66
NUP98P52948 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP98P52948 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP98P52948 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
NUP98P52948 OR51A6P-201ENST00000418680 1004 ntBASIC4.69□□□□□ -1.66
NUP98P52948 DBIP2-201ENST00000419076 262 ntBASIC4.69□□□□□ -1.66
NUP98P52948 AC245054.1-201ENST00000420944 258 ntBASIC4.69□□□□□ -1.66
NUP98P52948 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.69□□□□□ -1.66
NUP98P52948 AP000563.1-201ENST00000490865 758 ntBASIC4.69□□□□□ -1.66
NUP98P52948 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
NUP98P52948 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.69□□□□□ -1.66
NUP98P52948 CYP4A43P-201ENST00000568156 121 ntBASIC4.69□□□□□ -1.66
NUP98P52948 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP98P52948 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.69□□□□□ -1.66
NUP98P52948 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.69□□□□□ -1.66
NUP98P52948 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUP98P52948 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUP98P52948 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP98P52948 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
NUP98P52948 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.69□□□□□ -1.66
NUP98P52948 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP98P52948 AC023632.6-201ENST00000624338 2177 ntBASIC4.69□□□□□ -1.66
NUP98P52948 PTMAP5-201ENST00000393073 333 ntBASIC4.69□□□□□ -1.66
NUP98P52948 AC114814.2-201ENST00000419195 485 ntBASIC4.69□□□□□ -1.66
NUP98P52948 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.69□□□□□ -1.66
NUP98P52948 PLGLA-201ENST00000465668 449 ntBASIC4.69□□□□□ -1.66
NUP98P52948 AL358832.1-201ENST00000497800 389 ntBASIC4.69□□□□□ -1.66
NUP98P52948 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
NUP98P52948 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.69□□□□□ -1.66
NUP98P52948 MIR8058-201ENST00000615737 89 ntBASIC4.69□□□□□ -1.66
NUP98P52948 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
NUP98P52948 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
NUP98P52948 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUP98P52948 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUP98P52948 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUP98P52948 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NUP98P52948 RNA5SP72-201ENST00000364442 117 ntBASIC4.68□□□□□ -1.66
NUP98P52948 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
NUP98P52948 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
NUP98P52948 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.68□□□□□ -1.66
NUP98P52948 PDSS1P2-201ENST00000449397 678 ntBASIC4.68□□□□□ -1.66
NUP98P52948 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.68□□□□□ -1.66
NUP98P52948 AC093524.1-201ENST00000564266 1094 ntBASIC4.68□□□□□ -1.66
NUP98P52948 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.68□□□□□ -1.66
NUP98P52948 AL133247.2-201ENST00000603236 482 ntBASIC4.68□□□□□ -1.66
NUP98P52948 ELOCP35-201ENST00000604289 336 ntBASIC4.68□□□□□ -1.66
NUP98P52948 AC005972.3-201ENST00000606304 481 ntBASIC4.68□□□□□ -1.66
NUP98P52948 SNORA62.6-201ENST00000606322 83 ntBASIC4.68□□□□□ -1.66
NUP98P52948 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUP98P52948 CDY11P-201ENST00000447168 1651 ntBASIC4.68□□□□□ -1.66
NUP98P52948 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
NUP98P52948 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUP98P52948 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUP98P52948 MUC2-202ENST00000613187 4845 ntBASIC4.68□□□□□ -1.66
NUP98P52948 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
NUP98P52948 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.68□□□□□ -1.66
NUP98P52948 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.68□□□□□ -1.66
NUP98P52948 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
NUP98P52948 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
NUP98P52948 AC008280.1-201ENST00000418851 412 ntBASIC4.67□□□□□ -1.66
NUP98P52948 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.67□□□□□ -1.66
NUP98P52948 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP98P52948 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP98P52948 AC091953.5-201ENST00000622919 233 ntBASIC4.67□□□□□ -1.66
NUP98P52948 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP98P52948 MAPK10-253ENST00000641010 4072 ntBASIC4.67□□□□□ -1.66
NUP98P52948 AC083899.2-201ENST00000423285 1376 ntBASIC4.67□□□□□ -1.66
NUP98P52948 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.67□□□□□ -1.66
NUP98P52948 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
NUP98P52948 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.67□□□□□ -1.66
NUP98P52948 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
NUP98P52948 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP98P52948 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NUP98P52948 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.67□□□□□ -1.66
NUP98P52948 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP98P52948 AC096644.3-201ENST00000416788 338 ntBASIC4.67□□□□□ -1.66
NUP98P52948 AL035423.1-201ENST00000420331 213 ntBASIC4.67□□□□□ -1.66
NUP98P52948 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.67□□□□□ -1.66
NUP98P52948 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP98P52948 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.67□□□□□ -1.66
NUP98P52948 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
NUP98P52948 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.67□□□□□ -1.66
NUP98P52948 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms