Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NEK3P51956 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NEK3P51956 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
NEK3P51956 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.29□□□□□ -1.56
NEK3P51956 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NEK3P51956 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.29□□□□□ -1.56
NEK3P51956 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NEK3P51956 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.29□□□□□ -1.56
NEK3P51956 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NEK3P51956 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NEK3P51956 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEK3P51956 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NEK3P51956 RNU6-492P-201ENST00000363035 104 ntBASIC5.29□□□□□ -1.56
NEK3P51956 MIR600-201ENST00000385007 98 ntBASIC5.29□□□□□ -1.56
NEK3P51956 MIR589-201ENST00000385238 99 ntBASIC5.29□□□□□ -1.56
NEK3P51956 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.29□□□□□ -1.56
NEK3P51956 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
NEK3P51956 RNU2-21P-201ENST00000410368 188 ntBASIC5.29□□□□□ -1.56
NEK3P51956 ELOCP9-201ENST00000418624 239 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEK3P51956 YWHAZP8-201ENST00000436935 731 ntBASIC5.29□□□□□ -1.56
NEK3P51956 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.29□□□□□ -1.56
NEK3P51956 AC093155.1-201ENST00000440164 826 ntBASIC5.29□□□□□ -1.56
NEK3P51956 PTENP1-201ENST00000447117 1215 ntBASIC5.29□□□□□ -1.56
NEK3P51956 COX6CP18-201ENST00000448769 222 ntBASIC5.29□□□□□ -1.56
NEK3P51956 snoU13.7-201ENST00000459220 104 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC108161.1-201ENST00000461060 402 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC004453.1-201ENST00000487895 408 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.29□□□□□ -1.56
NEK3P51956 PRELID3BP5-201ENST00000508612 460 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEK3P51956 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.29□□□□□ -1.56
NEK3P51956 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.29□□□□□ -1.56
NEK3P51956 AC027309.2-201ENST00000520566 192 ntBASIC5.29□□□□□ -1.56
NEK3P51956 NPM1P6-201ENST00000521088 871 ntBASIC5.29□□□□□ -1.56
NEK3P51956 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEK3P51956 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NEK3P51956 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.29□□□□□ -1.56
NEK3P51956 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.29□□□□□ -1.56
NEK3P51956 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.29□□□□□ -1.56
NEK3P51956 AL161713.1-201ENST00000555538 145 ntBASIC5.29□□□□□ -1.56
NEK3P51956 MTCYBP28-201ENST00000566728 1132 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC067852.4-201ENST00000590314 478 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.29□□□□□ -1.56
NEK3P51956 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.29□□□□□ -1.56
NEK3P51956 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.29□□□□□ -1.56
NEK3P51956 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.29□□□□□ -1.56
NEK3P51956 MRPS35P3-201ENST00000603189 709 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC087763.1-201ENST00000603391 286 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC115621.1-201ENST00000604653 858 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC009597.2-201ENST00000604659 592 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.29□□□□□ -1.56
NEK3P51956 AL445222.1-201ENST00000607259 628 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC007349.4-201ENST00000608114 532 ntBASIC5.29□□□□□ -1.56
NEK3P51956 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NEK3P51956 AC131238.1-201ENST00000617135 328 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC009704.2-201ENST00000618739 483 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC109809.1-201ENST00000619665 545 ntBASIC5.29□□□□□ -1.56
NEK3P51956 AC099494.2-201ENST00000623371 978 ntBASIC5.29□□□□□ -1.56
NEK3P51956 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
NEK3P51956 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NEK3P51956 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
NEK3P51956 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NEK3P51956 EIF2AP4-201ENST00000424793 1781 ntBASIC5.29□□□□□ -1.56
NEK3P51956 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.29□□□□□ -1.56
NEK3P51956 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.29□□□□□ -1.56
NEK3P51956 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
NEK3P51956 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NEK3P51956 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NEK3P51956 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NEK3P51956 SEPT7P7-201ENST00000420492 1301 ntBASIC5.28□□□□□ -1.56
NEK3P51956 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NEK3P51956 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NEK3P51956 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
NEK3P51956 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEK3P51956 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEK3P51956 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NEK3P51956 RNA5SP305-201ENST00000362665 119 ntBASIC5.28□□□□□ -1.56
NEK3P51956 U3.3-201ENST00000362986 216 ntBASIC5.28□□□□□ -1.56
NEK3P51956 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.28□□□□□ -1.56
NEK3P51956 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.28□□□□□ -1.56
NEK3P51956 FCF1P2-201ENST00000415284 583 ntBASIC5.28□□□□□ -1.56
NEK3P51956 RPL7P44-201ENST00000424827 742 ntBASIC5.28□□□□□ -1.56
NEK3P51956 AC008065.1-201ENST00000428525 348 ntBASIC5.28□□□□□ -1.56
NEK3P51956 AC073850.1-201ENST00000449243 255 ntBASIC5.28□□□□□ -1.56
NEK3P51956 DNAJB5P1-201ENST00000454004 806 ntBASIC5.28□□□□□ -1.56
NEK3P51956 AC010307.1-201ENST00000467206 836 ntBASIC5.28□□□□□ -1.56
NEK3P51956 AC093270.2-201ENST00000486157 792 ntBASIC5.28□□□□□ -1.56
NEK3P51956 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.28□□□□□ -1.56
NEK3P51956 RN7SL808P-201ENST00000496066 299 ntBASIC5.28□□□□□ -1.56
NEK3P51956 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.28□□□□□ -1.56
NEK3P51956 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.28□□□□□ -1.56
NEK3P51956 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.28□□□□□ -1.56
NEK3P51956 AC092490.3-201ENST00000545370 572 ntBASIC5.28□□□□□ -1.56
NEK3P51956 GTF2IP8-201ENST00000560687 584 ntBASIC5.28□□□□□ -1.56
NEK3P51956 MTATP6P24-201ENST00000576835 677 ntBASIC5.28□□□□□ -1.56
NEK3P51956 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.28□□□□□ -1.56
NEK3P51956 AC025588.2-201ENST00000604851 466 ntBASIC5.28□□□□□ -1.56
NEK3P51956 BX005214.3-202ENST00000619809 325 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms