Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
USP11P51784 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 ZBTB8OSP1-201ENST00000342688 498 ntBASIC6.47□□□□□ -1.37
USP11P51784 Y_RNA.295-201ENST00000364918 102 ntBASIC6.47□□□□□ -1.37
USP11P51784 RNA5SP131-201ENST00000365452 119 ntBASIC6.47□□□□□ -1.37
USP11P51784 RNA5SP30-201ENST00000365552 115 ntBASIC6.47□□□□□ -1.37
USP11P51784 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 RNU1-136P-201ENST00000384181 164 ntBASIC6.47□□□□□ -1.37
USP11P51784 Y_RNA.529-201ENST00000384586 119 ntBASIC6.47□□□□□ -1.37
USP11P51784 CBX1P3-201ENST00000413296 527 ntBASIC6.47□□□□□ -1.37
USP11P51784 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 RNF10P1-201ENST00000418589 369 ntBASIC6.47□□□□□ -1.37
USP11P51784 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.47□□□□□ -1.37
USP11P51784 DSTNP5-201ENST00000427921 523 ntBASIC6.47□□□□□ -1.37
USP11P51784 AL512649.1-201ENST00000428997 581 ntBASIC6.47□□□□□ -1.37
USP11P51784 HSPD1P12-201ENST00000429127 1069 ntBASIC6.47□□□□□ -1.37
USP11P51784 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.47□□□□□ -1.37
USP11P51784 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 AC002504.1-201ENST00000438281 691 ntBASIC6.47□□□□□ -1.37
USP11P51784 AC093019.1-201ENST00000443135 252 ntBASIC6.47□□□□□ -1.37
USP11P51784 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.47□□□□□ -1.37
USP11P51784 AL161636.2-201ENST00000445179 927 ntBASIC6.47□□□□□ -1.37
USP11P51784 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.47□□□□□ -1.37
USP11P51784 VDAC2P4-201ENST00000452925 711 ntBASIC6.47□□□□□ -1.37
USP11P51784 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.47□□□□□ -1.37
USP11P51784 RPL12P39-201ENST00000455456 496 ntBASIC6.47□□□□□ -1.37
USP11P51784 LARP1BP2-201ENST00000486594 519 ntBASIC6.47□□□□□ -1.37
USP11P51784 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.47□□□□□ -1.37
USP11P51784 AC009646.1-201ENST00000510455 318 ntBASIC6.47□□□□□ -1.37
USP11P51784 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
USP11P51784 AC108120.2-201ENST00000512973 294 ntBASIC6.47□□□□□ -1.37
USP11P51784 AP001804.2-201ENST00000533932 910 ntBASIC6.47□□□□□ -1.37
USP11P51784 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.47□□□□□ -1.37
USP11P51784 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.47□□□□□ -1.37
USP11P51784 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.47□□□□□ -1.37
USP11P51784 MIR3671-201ENST00000580455 88 ntBASIC6.47□□□□□ -1.37
USP11P51784 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 AC060780.2-201ENST00000589047 198 ntBASIC6.47□□□□□ -1.37
USP11P51784 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 AC027807.2-201ENST00000616099 408 ntBASIC6.47□□□□□ -1.37
USP11P51784 MIR6729-201ENST00000618194 65 ntBASIC6.47□□□□□ -1.37
USP11P51784 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC6.47□□□□□ -1.37
USP11P51784 AC073348.1-201ENST00000623002 331 ntBASIC6.47□□□□□ -1.37
USP11P51784 AC007342.8-201ENST00000623278 678 ntBASIC6.47□□□□□ -1.37
USP11P51784 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 AC020656.2-201ENST00000613291 5309 ntBASIC6.47□□□□□ -1.37
USP11P51784 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.47□□□□□ -1.37
USP11P51784 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.47□□□□□ -1.37
USP11P51784 LINC01963-201ENST00000562038 3148 ntBASIC6.47□□□□□ -1.37
USP11P51784 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
USP11P51784 NLRP3P1-201ENST00000622303 1785 ntBASIC6.46□□□□□ -1.37
USP11P51784 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
USP11P51784 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.46□□□□□ -1.37
USP11P51784 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
USP11P51784 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
USP11P51784 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
USP11P51784 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
USP11P51784 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.46□□□□□ -1.37
USP11P51784 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.46□□□□□ -1.37
USP11P51784 MRE11P1-201ENST00000464884 2127 ntBASIC6.46□□□□□ -1.37
USP11P51784 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
USP11P51784 RNU5F-6P-201ENST00000362979 116 ntBASIC6.46□□□□□ -1.38
USP11P51784 Y_RNA.89-201ENST00000363031 102 ntBASIC6.46□□□□□ -1.38
USP11P51784 RNU6-433P-201ENST00000363216 104 ntBASIC6.46□□□□□ -1.38
USP11P51784 SNORA63-201ENST00000363450 132 ntBASIC6.46□□□□□ -1.38
USP11P51784 Y_RNA.356-201ENST00000365475 113 ntBASIC6.46□□□□□ -1.38
USP11P51784 RNA5SP88-201ENST00000365560 109 ntBASIC6.46□□□□□ -1.38
USP11P51784 RNU6-332P-201ENST00000391193 108 ntBASIC6.46□□□□□ -1.38
USP11P51784 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
USP11P51784 AC068533.2-201ENST00000411872 306 ntBASIC6.46□□□□□ -1.38
USP11P51784 AC013404.1-201ENST00000413068 249 ntBASIC6.46□□□□□ -1.38
USP11P51784 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.46□□□□□ -1.38
USP11P51784 METTL15P3-201ENST00000415522 1221 ntBASIC6.46□□□□□ -1.38
USP11P51784 BTF3L4P3-201ENST00000418879 476 ntBASIC6.46□□□□□ -1.38
USP11P51784 SDCBPP3-201ENST00000419629 891 ntBASIC6.46□□□□□ -1.38
USP11P51784 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.46□□□□□ -1.38
USP11P51784 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.46□□□□□ -1.38
USP11P51784 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
USP11P51784 AC113412.1-201ENST00000425840 504 ntBASIC6.46□□□□□ -1.38
USP11P51784 RPL31P54-201ENST00000429803 370 ntBASIC6.46□□□□□ -1.38
USP11P51784 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.46□□□□□ -1.38
USP11P51784 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
USP11P51784 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
USP11P51784 AL022578.1-201ENST00000439330 1433 ntBASIC6.46□□□□□ -1.38
USP11P51784 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.46□□□□□ -1.38
USP11P51784 RPL36AP39-201ENST00000445859 318 ntBASIC6.46□□□□□ -1.38
USP11P51784 PDSS1P2-201ENST00000449397 678 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms