Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.99□□□□□ -1.45
MRE11P49959 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.99□□□□□ -1.45
MRE11P49959 AC122134.1-201ENST00000565664 1104 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AC015720.2-201ENST00000567709 334 ntBASIC5.99□□□□□ -1.45
MRE11P49959 MIR3934-201ENST00000579806 107 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.99□□□□□ -1.45
MRE11P49959 MTCO2P22-201ENST00000603246 681 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AL157770.1-201ENST00000623049 439 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AP002799.1-201ENST00000623552 423 ntBASIC5.99□□□□□ -1.45
MRE11P49959 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.99□□□□□ -1.45
MRE11P49959 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
MRE11P49959 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
MRE11P49959 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
MRE11P49959 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
MRE11P49959 NEAT1-202ENST00000501122 22743 ntBASIC5.99□□□□□ -1.45
MRE11P49959 AC104446.1-201ENST00000613728 1321 ntBASIC5.99□□□□□ -1.45
MRE11P49959 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MRE11P49959 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.98□□□□□ -1.45
MRE11P49959 AC007342.7-201ENST00000624610 2337 ntBASIC5.98□□□□□ -1.45
MRE11P49959 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
MRE11P49959 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
MRE11P49959 RNU6-304P-201ENST00000364855 107 ntBASIC5.98□□□□□ -1.45
MRE11P49959 MIR23B-201ENST00000384832 97 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AC023128.2-201ENST00000420880 1223 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AL593851.1-201ENST00000426171 157 ntBASIC5.98□□□□□ -1.45
MRE11P49959 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AL360081.1-201ENST00000428299 555 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AL360221.1-201ENST00000445989 335 ntBASIC5.98□□□□□ -1.45
MRE11P49959 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.98□□□□□ -1.45
MRE11P49959 OR52J1P-201ENST00000450596 932 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AL035090.1-201ENST00000454835 332 ntBASIC5.98□□□□□ -1.45
MRE11P49959 RANP1-206ENST00000455094 651 ntBASIC5.98□□□□□ -1.45
MRE11P49959 RPS23P6-201ENST00000466136 431 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AC092754.1-201ENST00000472975 479 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.98□□□□□ -1.45
MRE11P49959 HPRT1P2-201ENST00000505250 544 ntBASIC5.98□□□□□ -1.45
MRE11P49959 FABP5P12-201ENST00000515543 389 ntBASIC5.98□□□□□ -1.45
MRE11P49959 RN7SKP141-201ENST00000516167 338 ntBASIC5.98□□□□□ -1.45
MRE11P49959 RNU6-232P-201ENST00000517144 64 ntBASIC5.98□□□□□ -1.45
MRE11P49959 RPL12P22-201ENST00000519073 490 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AC134698.4-201ENST00000523451 826 ntBASIC5.98□□□□□ -1.45
MRE11P49959 BRD9P1-201ENST00000529855 560 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.98□□□□□ -1.45
MRE11P49959 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.98□□□□□ -1.45
MRE11P49959 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.98□□□□□ -1.45
MRE11P49959 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.98□□□□□ -1.45
MRE11P49959 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.98□□□□□ -1.45
MRE11P49959 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.98□□□□□ -1.45
MRE11P49959 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.98□□□□□ -1.45
MRE11P49959 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.98□□□□□ -1.45
MRE11P49959 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.98□□□□□ -1.45
MRE11P49959 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.98□□□□□ -1.45
MRE11P49959 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.98□□□□□ -1.45
MRE11P49959 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.98□□□□□ -1.45
MRE11P49959 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC5.98□□□□□ -1.45
MRE11P49959 AL159169.2-201ENST00000610061 1269 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.98□□□□□ -1.45
MRE11P49959 AL359715.5-201ENST00000623431 443 ntBASIC5.98□□□□□ -1.45
MRE11P49959 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
MRE11P49959 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MRE11P49959 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MRE11P49959 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.98□□□□□ -1.45
MRE11P49959 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MRE11P49959 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
MRE11P49959 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
MRE11P49959 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.97□□□□□ -1.45
MRE11P49959 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.97□□□□□ -1.45
MRE11P49959 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MRE11P49959 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.97□□□□□ -1.45
MRE11P49959 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
MRE11P49959 MTND4P34-201ENST00000572715 1371 ntBASIC5.97□□□□□ -1.45
MRE11P49959 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.97□□□□□ -1.45
MRE11P49959 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.97□□□□□ -1.45
MRE11P49959 RNU6-249P-201ENST00000363016 102 ntBASIC5.97□□□□□ -1.45
MRE11P49959 ATP5F1P3-201ENST00000397213 657 ntBASIC5.97□□□□□ -1.45
MRE11P49959 RSL24D1P4-201ENST00000400938 484 ntBASIC5.97□□□□□ -1.45
MRE11P49959 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.97□□□□□ -1.45
MRE11P49959 LINC01881-201ENST00000416103 412 ntBASIC5.97□□□□□ -1.45
MRE11P49959 Z75741.2-201ENST00000417272 1167 ntBASIC5.97□□□□□ -1.45
MRE11P49959 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.97□□□□□ -1.45
MRE11P49959 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.97□□□□□ -1.45
MRE11P49959 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.97□□□□□ -1.45
MRE11P49959 RPL7P53-201ENST00000421245 739 ntBASIC5.97□□□□□ -1.45
MRE11P49959 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.97□□□□□ -1.45
MRE11P49959 ETF1P3-201ENST00000430422 1160 ntBASIC5.97□□□□□ -1.45
MRE11P49959 MOB1AP1-201ENST00000430903 535 ntBASIC5.97□□□□□ -1.45
MRE11P49959 RPL12P17-201ENST00000432393 498 ntBASIC5.97□□□□□ -1.45
MRE11P49959 ELOCP8-201ENST00000439309 332 ntBASIC5.97□□□□□ -1.45
MRE11P49959 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.97□□□□□ -1.45
MRE11P49959 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
MRE11P49959 ELOCP15-201ENST00000442090 332 ntBASIC5.97□□□□□ -1.45
MRE11P49959 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.97□□□□□ -1.45
MRE11P49959 HMGB1P5-202ENST00000451497 985 ntBASIC5.97□□□□□ -1.45
MRE11P49959 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.97□□□□□ -1.45
MRE11P49959 AC069528.1-202ENST00000482888 637 ntBASIC5.97□□□□□ -1.45
MRE11P49959 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.97□□□□□ -1.45
MRE11P49959 ENPP7P9-201ENST00000514456 627 ntBASIC5.97□□□□□ -1.45
MRE11P49959 RNU6-759P-201ENST00000516740 103 ntBASIC5.97□□□□□ -1.45
MRE11P49959 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.97□□□□□ -1.45
MRE11P49959 HMGN2P36-201ENST00000529541 409 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms