Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTPN9P43378 RNU4-28P-201ENST00000364739 141 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTPN9P43378 RNU6-224P-201ENST00000384055 107 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 RN7SKP267-201ENST00000410381 285 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 BTF3P8-201ENST00000414577 526 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN9P43378 AC140479.3-201ENST00000418944 1126 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 MTCO2P21-201ENST00000419780 677 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN9P43378 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.89□□□□□ -1.63
PTPN9P43378 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN9P43378 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN9P43378 AC084290.1-201ENST00000434995 374 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN9P43378 CR769776.1-201ENST00000441254 787 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN9P43378 AL589880.1-201ENST00000448271 287 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AL645937.3-201ENST00000453647 936 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC108751.2-201ENST00000469993 231 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 RPL23AP37-201ENST00000479658 549 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 RPL7AP10-201ENST00000481016 791 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN9P43378 AC011005.3-201ENST00000491624 395 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 RPL36AP41-201ENST00000493820 306 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN9P43378 RNU2-30P-201ENST00000516209 141 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 RNA5SP360-201ENST00000516555 118 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN9P43378 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN9P43378 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN9P43378 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN9P43378 LRRC34P1-201ENST00000542742 915 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN9P43378 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.89□□□□□ -1.63
PTPN9P43378 NPM1P47-201ENST00000560843 856 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC015912.2-201ENST00000571053 181 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 RN7SL652P-201ENST00000577769 300 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.89□□□□□ -1.63
PTPN9P43378 AL357094.1-201ENST00000603845 844 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC002487.1-201ENST00000604565 994 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 FAM25E-202ENST00000608562 189 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC055764.2-201ENST00000610089 670 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AC087683.2-201ENST00000611384 326 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 uc_338.9-201ENST00000617424 182 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 VN1R7P-201ENST00000619242 903 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 MIR6853-201ENST00000619642 74 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AL359757.1-201ENST00000623176 255 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
PTPN9P43378 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN9P43378 OR51H2P-202ENST00000641424 3046 ntBASIC4.89□□□□□ -1.63
PTPN9P43378 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN9P43378 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.88□□□□□ -1.63
PTPN9P43378 AC006042.3-201ENST00000454684 1469 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN9P43378 AC125257.1-201ENST00000560400 2930 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN9P43378 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PTPN9P43378 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN9P43378 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PTPN9P43378 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN9P43378 RNU4-68P-201ENST00000364314 141 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN9P43378 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN9P43378 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
PTPN9P43378 AL136310.1-201ENST00000404926 654 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN9P43378 RNU4-22P-201ENST00000411058 166 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 RPL22P18-201ENST00000417197 377 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 TRGV6-201ENST00000417928 299 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 RPS3AP37-201ENST00000419176 745 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 AC027644.1-201ENST00000419595 298 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 AL513175.2-201ENST00000422071 443 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.88□□□□□ -1.63
PTPN9P43378 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN9P43378 AL929288.2-201ENST00000446368 407 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 NPM1P39-201ENST00000449818 867 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 PTGES3P5-201ENST00000455109 434 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 RPL23AP12-201ENST00000467573 473 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 TRBV8-2-201ENST00000475637 270 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 AC068587.2-201ENST00000478386 781 ntBASIC4.88□□□□□ -1.63
PTPN9P43378 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.88□□□□□ -1.63
PTPN9P43378 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.88□□□□□ -1.63
PTPN9P43378 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.88□□□□□ -1.63
PTPN9P43378 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms