Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AL355852.1-201ENST00000454081 1771 ntBASIC4.21□□□□□ -1.74
SOX3P41225 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX3P41225 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX3P41225 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.21□□□□□ -1.74
SOX3P41225 RAD17P1-201ENST00000418130 2042 ntBASIC4.21□□□□□ -1.74
SOX3P41225 AC093311.1-201ENST00000506586 2021 ntBASIC4.21□□□□□ -1.74
SOX3P41225 AC139713.2-214ENST00000642059 1811 ntBASIC4.21□□□□□ -1.74
SOX3P41225 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX3P41225 MTCO1P18-201ENST00000455518 1419 ntBASIC4.21□□□□□ -1.74
SOX3P41225 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX3P41225 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
SOX3P41225 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SOX3P41225 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SOX3P41225 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX3P41225 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SOX3P41225 TCEA1P4-201ENST00000415066 844 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX3P41225 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX3P41225 OR2X1P-201ENST00000421144 687 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC073310.1-201ENST00000423226 1033 ntBASIC4.2□□□□□ -1.74
SOX3P41225 RPL7AP25-201ENST00000423357 805 ntBASIC4.2□□□□□ -1.74
SOX3P41225 GTF2IP2-201ENST00000424290 697 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC115285.1-201ENST00000424879 736 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.2□□□□□ -1.74
SOX3P41225 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX3P41225 RPL12P28-201ENST00000430852 489 ntBASIC4.2□□□□□ -1.74
SOX3P41225 RPS7P2-201ENST00000435134 607 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AL353093.1-201ENST00000441292 436 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX3P41225 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX3P41225 TVP23BP2-201ENST00000455082 615 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC018635.1-201ENST00000468292 1030 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC013356.1-201ENST00000489027 564 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC108022.1-201ENST00000493466 478 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC010374.1-201ENST00000503762 1237 ntBASIC4.2□□□□□ -1.74
SOX3P41225 TPT1P8-201ENST00000510120 555 ntBASIC4.2□□□□□ -1.74
SOX3P41225 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX3P41225 RNA5SP446-201ENST00000515955 82 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX3P41225 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.2□□□□□ -1.74
SOX3P41225 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.2□□□□□ -1.74
SOX3P41225 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX3P41225 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX3P41225 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.2□□□□□ -1.74
SOX3P41225 MTND6P33-201ENST00000571794 183 ntBASIC4.2□□□□□ -1.74
SOX3P41225 MIR548Y-201ENST00000582739 110 ntBASIC4.2□□□□□ -1.74
SOX3P41225 ELOCP28-201ENST00000590044 317 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX3P41225 RPL7P50-201ENST00000600588 727 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC124856.1-201ENST00000600819 896 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC023762.1-201ENST00000603280 584 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC112503.1-201ENST00000608436 391 ntBASIC4.2□□□□□ -1.74
SOX3P41225 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX3P41225 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX3P41225 MIR378J-201ENST00000611988 109 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AL353726.1-201ENST00000614041 1000 ntBASIC4.2□□□□□ -1.74
SOX3P41225 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SOX3P41225 AC099654.8-201ENST00000637757 681 ntBASIC4.2□□□□□ -1.74
SOX3P41225 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX3P41225 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SOX3P41225 AC068254.2-201ENST00000623938 3577 ntBASIC4.2□□□□□ -1.74
SOX3P41225 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SOX3P41225 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SOX3P41225 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX3P41225 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SOX3P41225 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SOX3P41225 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
SOX3P41225 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SOX3P41225 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX3P41225 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX3P41225 AC015813.6-201ENST00000624409 5808 ntBASIC4.19□□□□□ -1.74
SOX3P41225 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SOX3P41225 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
SOX3P41225 RNU1-108P-201ENST00000362556 161 ntBASIC4.19□□□□□ -1.74
SOX3P41225 RNA5SP447-201ENST00000363749 119 ntBASIC4.19□□□□□ -1.74
SOX3P41225 AC234772.1-201ENST00000377927 937 ntBASIC4.19□□□□□ -1.74
SOX3P41225 RNU6-225P-201ENST00000384613 103 ntBASIC4.19□□□□□ -1.74
SOX3P41225 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX3P41225 AC241520.1-201ENST00000422654 1099 ntBASIC4.19□□□□□ -1.74
SOX3P41225 RPL21P43-201ENST00000425440 472 ntBASIC4.19□□□□□ -1.74
SOX3P41225 AC093422.3-201ENST00000428506 305 ntBASIC4.19□□□□□ -1.74
SOX3P41225 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX3P41225 AC016712.1-201ENST00000431088 378 ntBASIC4.19□□□□□ -1.74
SOX3P41225 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.19□□□□□ -1.74
SOX3P41225 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX3P41225 RNU7-27P-201ENST00000459281 62 ntBASIC4.19□□□□□ -1.74
SOX3P41225 RPL21P126-201ENST00000470049 478 ntBASIC4.19□□□□□ -1.74
SOX3P41225 RPL23AP65-201ENST00000475608 468 ntBASIC4.19□□□□□ -1.74
SOX3P41225 AC012158.1-204ENST00000483430 465 ntBASIC4.19□□□□□ -1.74
SOX3P41225 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX3P41225 CEACAMP10-202ENST00000495431 496 ntBASIC4.19□□□□□ -1.74
SOX3P41225 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX3P41225 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX3P41225 RPS27AP18-201ENST00000515536 459 ntBASIC4.19□□□□□ -1.74
SOX3P41225 RNU6-415P-201ENST00000516252 97 ntBASIC4.19□□□□□ -1.74
SOX3P41225 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX3P41225 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SOX3P41225 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX3P41225 AL121834.1-201ENST00000572284 509 ntBASIC4.19□□□□□ -1.74
SOX3P41225 MIR4277-201ENST00000578298 84 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms