Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFC3P40938 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
RFC3P40938 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RFC3P40938 RNA5SP175-201ENST00000364275 119 ntBASIC3.94□□□□□ -1.78
RFC3P40938 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFC3P40938 RPS27AP11-201ENST00000402798 447 ntBASIC3.94□□□□□ -1.78
RFC3P40938 AL035696.2-201ENST00000407941 709 ntBASIC3.94□□□□□ -1.78
RFC3P40938 RNA5SP317-201ENST00000410176 116 ntBASIC3.94□□□□□ -1.78
RFC3P40938 RNA5SP311-201ENST00000411290 116 ntBASIC3.94□□□□□ -1.78
RFC3P40938 AC048351.1-201ENST00000420064 602 ntBASIC3.94□□□□□ -1.78
RFC3P40938 YY1P1-201ENST00000427625 668 ntBASIC3.94□□□□□ -1.78
RFC3P40938 OR4C10P-201ENST00000434991 931 ntBASIC3.94□□□□□ -1.78
RFC3P40938 MAPRE1P3-201ENST00000435438 796 ntBASIC3.94□□□□□ -1.78
RFC3P40938 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.94□□□□□ -1.78
RFC3P40938 RPL7P28-201ENST00000437739 740 ntBASIC3.94□□□□□ -1.78
RFC3P40938 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFC3P40938 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.94□□□□□ -1.78
RFC3P40938 DDX39BP2-208ENST00000453923 258 ntBASIC3.94□□□□□ -1.78
RFC3P40938 RPL23AP65-201ENST00000475608 468 ntBASIC3.94□□□□□ -1.78
RFC3P40938 RPL35P6-201ENST00000490024 372 ntBASIC3.94□□□□□ -1.78
RFC3P40938 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.94□□□□□ -1.78
RFC3P40938 AC139783.2-201ENST00000504847 1145 ntBASIC3.94□□□□□ -1.78
RFC3P40938 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFC3P40938 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFC3P40938 RNA5SP315-201ENST00000516340 116 ntBASIC3.94□□□□□ -1.78
RFC3P40938 RNA5SP312-201ENST00000517068 116 ntBASIC3.94□□□□□ -1.78
RFC3P40938 AC067904.2-201ENST00000517322 1283 ntBASIC3.94□□□□□ -1.78
RFC3P40938 IGLV3-26-201ENST00000520756 302 ntBASIC3.94□□□□□ -1.78
RFC3P40938 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.94□□□□□ -1.78
RFC3P40938 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.94□□□□□ -1.78
RFC3P40938 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.94□□□□□ -1.78
RFC3P40938 AC068446.3-201ENST00000555285 382 ntBASIC3.94□□□□□ -1.78
RFC3P40938 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.94□□□□□ -1.78
RFC3P40938 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.94□□□□□ -1.78
RFC3P40938 AL021997.2-201ENST00000615674 271 ntBASIC3.94□□□□□ -1.78
RFC3P40938 AC019080.5-201ENST00000624891 757 ntBASIC3.94□□□□□ -1.78
RFC3P40938 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.94□□□□□ -1.78
RFC3P40938 AC009951.1-201ENST00000623674 2614 ntBASIC3.94□□□□□ -1.78
RFC3P40938 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
RFC3P40938 CYP1D1P-201ENST00000416662 1433 ntBASIC3.94□□□□□ -1.78
RFC3P40938 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RFC3P40938 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 HSPD1P14-201ENST00000432666 1618 ntBASIC3.93□□□□□ -1.78
RFC3P40938 RNU6-146P-201ENST00000384602 108 ntBASIC3.93□□□□□ -1.78
RFC3P40938 MIR320B1-201ENST00000390209 79 ntBASIC3.93□□□□□ -1.78
RFC3P40938 AL022722.2-201ENST00000402519 180 ntBASIC3.93□□□□□ -1.78
RFC3P40938 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.93□□□□□ -1.78
RFC3P40938 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.93□□□□□ -1.78
RFC3P40938 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.93□□□□□ -1.78
RFC3P40938 AC114495.1-201ENST00000441274 436 ntBASIC3.93□□□□□ -1.78
RFC3P40938 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.93□□□□□ -1.78
RFC3P40938 RPS7P7-201ENST00000463499 571 ntBASIC3.93□□□□□ -1.78
RFC3P40938 RN7SL812P-201ENST00000493791 279 ntBASIC3.93□□□□□ -1.78
RFC3P40938 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.93□□□□□ -1.78
RFC3P40938 PRELID3BP7-201ENST00000503606 469 ntBASIC3.93□□□□□ -1.78
RFC3P40938 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.93□□□□□ -1.78
RFC3P40938 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 AC021483.2-201ENST00000567415 758 ntBASIC3.93□□□□□ -1.78
RFC3P40938 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.93□□□□□ -1.78
RFC3P40938 PSMA6P4-201ENST00000603247 718 ntBASIC3.93□□□□□ -1.78
RFC3P40938 AC025175.1-201ENST00000606482 759 ntBASIC3.93□□□□□ -1.78
RFC3P40938 AP002360.3-201ENST00000607673 710 ntBASIC3.93□□□□□ -1.78
RFC3P40938 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.93□□□□□ -1.78
RFC3P40938 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.93□□□□□ -1.78
RFC3P40938 AL359715.5-201ENST00000623431 443 ntBASIC3.93□□□□□ -1.78
RFC3P40938 AC007546.2-201ENST00000623996 360 ntBASIC3.93□□□□□ -1.78
RFC3P40938 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.93□□□□□ -1.78
RFC3P40938 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
RFC3P40938 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
RFC3P40938 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
RFC3P40938 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.93□□□□□ -1.78
RFC3P40938 AL627171.1-201ENST00000618845 1308 ntBASIC3.93□□□□□ -1.78
RFC3P40938 OR11H5P-202ENST00000641612 1325 ntBASIC3.93□□□□□ -1.78
RFC3P40938 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.93□□□□□ -1.78
RFC3P40938 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RFC3P40938 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
RFC3P40938 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RFC3P40938 AC093311.1-201ENST00000506586 2021 ntBASIC3.92□□□□□ -1.78
RFC3P40938 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
RFC3P40938 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
RFC3P40938 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFC3P40938 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.92□□□□□ -1.78
RFC3P40938 RNU6-532P-201ENST00000384318 107 ntBASIC3.92□□□□□ -1.78
RFC3P40938 MIR3074-201ENST00000384885 81 ntBASIC3.92□□□□□ -1.78
RFC3P40938 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.92□□□□□ -1.78
RFC3P40938 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.92□□□□□ -1.78
RFC3P40938 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RFC3P40938 COX6B1P7-201ENST00000430845 235 ntBASIC3.92□□□□□ -1.78
RFC3P40938 CDY14P-201ENST00000431260 1014 ntBASIC3.92□□□□□ -1.78
RFC3P40938 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.92□□□□□ -1.78
RFC3P40938 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.92□□□□□ -1.78
RFC3P40938 CDY12P-201ENST00000440679 1015 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms