Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SCN4AP35499 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN4AP35499 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN4AP35499 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.72□□□□□ -1.65
SCN4AP35499 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.72□□□□□ -1.65
SCN4AP35499 RAD23BP3-201ENST00000454157 1152 ntBASIC4.72□□□□□ -1.65
SCN4AP35499 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.72□□□□□ -1.65
SCN4AP35499 MIR7702-201ENST00000621931 59 ntBASIC4.72□□□□□ -1.65
SCN4AP35499 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN4AP35499 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN4AP35499 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN4AP35499 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN4AP35499 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
SCN4AP35499 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.71□□□□□ -1.65
SCN4AP35499 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN4AP35499 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SCN4AP35499 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SCN4AP35499 CBX1P3-201ENST00000413296 527 ntBASIC4.71□□□□□ -1.66
SCN4AP35499 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.71□□□□□ -1.66
SCN4AP35499 AL591503.2-201ENST00000442314 1005 ntBASIC4.71□□□□□ -1.66
SCN4AP35499 FABP3P2-201ENST00000453169 399 ntBASIC4.71□□□□□ -1.66
SCN4AP35499 AC008481.1-201ENST00000463278 396 ntBASIC4.71□□□□□ -1.66
SCN4AP35499 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.71□□□□□ -1.66
SCN4AP35499 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.71□□□□□ -1.66
SCN4AP35499 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.71□□□□□ -1.66
SCN4AP35499 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.71□□□□□ -1.66
SCN4AP35499 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.71□□□□□ -1.66
SCN4AP35499 AL392088.2-201ENST00000637607 285 ntBASIC4.71□□□□□ -1.66
SCN4AP35499 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.71□□□□□ -1.66
SCN4AP35499 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SCN4AP35499 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.71□□□□□ -1.66
SCN4AP35499 OR51C1P-202ENST00000641159 1444 ntBASIC4.71□□□□□ -1.66
SCN4AP35499 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SCN4AP35499 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.71□□□□□ -1.66
SCN4AP35499 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN4AP35499 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.71□□□□□ -1.66
SCN4AP35499 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.7□□□□□ -1.66
SCN4AP35499 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCN4AP35499 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCN4AP35499 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
SCN4AP35499 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCN4AP35499 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN4AP35499 AL591419.1-201ENST00000427423 339 ntBASIC4.7□□□□□ -1.66
SCN4AP35499 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN4AP35499 RPS4XP10-201ENST00000465034 731 ntBASIC4.7□□□□□ -1.66
SCN4AP35499 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.7□□□□□ -1.66
SCN4AP35499 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.7□□□□□ -1.66
SCN4AP35499 AC087369.1-201ENST00000520775 996 ntBASIC4.7□□□□□ -1.66
SCN4AP35499 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SCN4AP35499 AC100770.1-201ENST00000532310 322 ntBASIC4.7□□□□□ -1.66
SCN4AP35499 AC012493.2-201ENST00000595083 291 ntBASIC4.7□□□□□ -1.66
SCN4AP35499 AC008638.3-201ENST00000603341 463 ntBASIC4.7□□□□□ -1.66
SCN4AP35499 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN4AP35499 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN4AP35499 AC097634.1-201ENST00000604491 2467 ntBASIC4.7□□□□□ -1.66
SCN4AP35499 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.7□□□□□ -1.66
SCN4AP35499 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SCN4AP35499 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN4AP35499 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
SCN4AP35499 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
SCN4AP35499 RNU6-1279P-201ENST00000383917 103 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 MIR128-1-201ENST00000384921 82 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 MIR195-201ENST00000385194 87 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 OR6C64P-201ENST00000419708 825 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SCN4AP35499 AL591363.1-201ENST00000450091 483 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 AC092691.2-201ENST00000461787 803 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 AP000563.1-201ENST00000490865 758 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN4AP35499 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN4AP35499 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN4AP35499 AC007458.1-201ENST00000542812 373 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN4AP35499 MIR8057-201ENST00000620957 69 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.69□□□□□ -1.66
SCN4AP35499 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.69□□□□□ -1.66
SCN4AP35499 AP002001.2-201ENST00000529025 1469 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.69□□□□□ -1.66
SCN4AP35499 EOGT-210ENST00000615922 1931 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.69□□□□□ -1.66
SCN4AP35499 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
SCN4AP35499 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN4AP35499 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SCN4AP35499 Z95327.2-201ENST00000414579 1873 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.69□□□□□ -1.66
SCN4AP35499 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.69□□□□□ -1.66
SCN4AP35499 SNORA48.2-201ENST00000390926 124 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 ATP5A1P2-201ENST00000412323 255 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.69□□□□□ -1.66
SCN4AP35499 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.69□□□□□ -1.66
SCN4AP35499 OR4K6P-201ENST00000416478 897 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.69□□□□□ -1.66
SCN4AP35499 RBMY1KP-201ENST00000423480 476 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 HSPE1P27-201ENST00000430808 296 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 RPS26P2-201ENST00000440331 348 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.69□□□□□ -1.66
SCN4AP35499 MTND6P6-201ENST00000478031 263 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
SCN4AP35499 PHBP17-201ENST00000528576 541 ntBASIC4.69□□□□□ -1.66
SCN4AP35499 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms