Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RORAP35398 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RORAP35398 RNA5SP502-201ENST00000362694 119 ntBASIC4.14□□□□□ -1.75
RORAP35398 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RORAP35398 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.14□□□□□ -1.75
RORAP35398 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.14□□□□□ -1.75
RORAP35398 VDAC1P6-201ENST00000430062 855 ntBASIC4.14□□□□□ -1.75
RORAP35398 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.14□□□□□ -1.75
RORAP35398 ARL5AP3-201ENST00000439327 386 ntBASIC4.14□□□□□ -1.75
RORAP35398 UBE2V1P3-201ENST00000439651 417 ntBASIC4.14□□□□□ -1.75
RORAP35398 AL353748.1-201ENST00000440753 474 ntBASIC4.14□□□□□ -1.75
RORAP35398 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RORAP35398 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.14□□□□□ -1.75
RORAP35398 DDX39BP2-208ENST00000453923 258 ntBASIC4.14□□□□□ -1.75
RORAP35398 AC104629.2-201ENST00000468627 598 ntBASIC4.14□□□□□ -1.75
RORAP35398 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.14□□□□□ -1.75
RORAP35398 RPL35P6-201ENST00000490024 372 ntBASIC4.14□□□□□ -1.75
RORAP35398 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
RORAP35398 AC108475.1-201ENST00000507880 950 ntBASIC4.14□□□□□ -1.75
RORAP35398 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.14□□□□□ -1.75
RORAP35398 PARP4P3-201ENST00000510265 317 ntBASIC4.14□□□□□ -1.75
RORAP35398 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RORAP35398 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.14□□□□□ -1.75
RORAP35398 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.14□□□□□ -1.75
RORAP35398 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RORAP35398 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.14□□□□□ -1.75
RORAP35398 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RORAP35398 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.14□□□□□ -1.75
RORAP35398 AC007224.1-201ENST00000564410 144 ntBASIC4.14□□□□□ -1.75
RORAP35398 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.14□□□□□ -1.75
RORAP35398 AL121834.1-201ENST00000572284 509 ntBASIC4.14□□□□□ -1.75
RORAP35398 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RORAP35398 AC068790.5-201ENST00000602741 355 ntBASIC4.14□□□□□ -1.75
RORAP35398 AC025946.2-201ENST00000603398 234 ntBASIC4.14□□□□□ -1.75
RORAP35398 AC010201.1-201ENST00000605051 540 ntBASIC4.14□□□□□ -1.75
RORAP35398 AC023043.4-201ENST00000612081 449 ntBASIC4.14□□□□□ -1.75
RORAP35398 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.14□□□□□ -1.75
RORAP35398 MIR7154-201ENST00000620673 73 ntBASIC4.14□□□□□ -1.75
RORAP35398 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RORAP35398 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.14□□□□□ -1.75
RORAP35398 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
RORAP35398 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.14□□□□□ -1.75
RORAP35398 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.14□□□□□ -1.75
RORAP35398 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.14□□□□□ -1.75
RORAP35398 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RORAP35398 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RORAP35398 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
RORAP35398 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.13□□□□□ -1.75
RORAP35398 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RORAP35398 MIR383-201ENST00000362257 73 ntBASIC4.13□□□□□ -1.75
RORAP35398 RNU6-819P-201ENST00000364116 107 ntBASIC4.13□□□□□ -1.75
RORAP35398 RNA5SP513-201ENST00000364648 118 ntBASIC4.13□□□□□ -1.75
RORAP35398 MIR93-201ENST00000385024 80 ntBASIC4.13□□□□□ -1.75
RORAP35398 MIR1193-201ENST00000408109 78 ntBASIC4.13□□□□□ -1.75
RORAP35398 RNA5SP239-201ENST00000410218 129 ntBASIC4.13□□□□□ -1.75
RORAP35398 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.13□□□□□ -1.75
RORAP35398 DYNLL1P7-201ENST00000429273 258 ntBASIC4.13□□□□□ -1.75
RORAP35398 CDY14P-201ENST00000431260 1014 ntBASIC4.13□□□□□ -1.75
RORAP35398 BX119904.1-201ENST00000432026 348 ntBASIC4.13□□□□□ -1.75
RORAP35398 AL132765.1-201ENST00000434165 553 ntBASIC4.13□□□□□ -1.75
RORAP35398 XKRYP6-201ENST00000440468 1116 ntBASIC4.13□□□□□ -1.75
RORAP35398 CDY12P-201ENST00000440679 1015 ntBASIC4.13□□□□□ -1.75
RORAP35398 XKRYP3-201ENST00000442113 1116 ntBASIC4.13□□□□□ -1.75
RORAP35398 CDY13P-201ENST00000445813 1015 ntBASIC4.13□□□□□ -1.75
RORAP35398 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.13□□□□□ -1.75
RORAP35398 CDY23P-201ENST00000451661 1014 ntBASIC4.13□□□□□ -1.75
RORAP35398 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.13□□□□□ -1.75
RORAP35398 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.13□□□□□ -1.75
RORAP35398 ATP5G1P3-201ENST00000463301 410 ntBASIC4.13□□□□□ -1.75
RORAP35398 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.13□□□□□ -1.75
RORAP35398 AC012158.1-204ENST00000483430 465 ntBASIC4.13□□□□□ -1.75
RORAP35398 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.13□□□□□ -1.75
RORAP35398 AC008958.1-201ENST00000511047 682 ntBASIC4.13□□□□□ -1.75
RORAP35398 SNORA31.9-201ENST00000516429 84 ntBASIC4.13□□□□□ -1.75
RORAP35398 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.13□□□□□ -1.75
RORAP35398 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.13□□□□□ -1.75
RORAP35398 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.13□□□□□ -1.75
RORAP35398 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.13□□□□□ -1.75
RORAP35398 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.13□□□□□ -1.75
RORAP35398 RPL23AP97-201ENST00000568955 471 ntBASIC4.13□□□□□ -1.75
RORAP35398 VN1R84P-201ENST00000593697 235 ntBASIC4.13□□□□□ -1.75
RORAP35398 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RORAP35398 HMGB1P51-201ENST00000605166 638 ntBASIC4.13□□□□□ -1.75
RORAP35398 AC025175.1-201ENST00000606482 759 ntBASIC4.13□□□□□ -1.75
RORAP35398 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.13□□□□□ -1.75
RORAP35398 AC005086.4-201ENST00000623065 213 ntBASIC4.13□□□□□ -1.75
RORAP35398 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.13□□□□□ -1.75
RORAP35398 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RORAP35398 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.13□□□□□ -1.75
RORAP35398 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RORAP35398 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RORAP35398 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RORAP35398 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RORAP35398 AC005261.4-201ENST00000600047 1385 ntBASIC4.13□□□□□ -1.75
RORAP35398 AC068254.2-201ENST00000623938 3577 ntBASIC4.13□□□□□ -1.75
RORAP35398 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RORAP35398 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RORAP35398 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
RORAP35398 SPATA2P1-201ENST00000431223 2055 ntBASIC4.12□□□□□ -1.75
RORAP35398 AL136964.1-201ENST00000622038 2990 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms