Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC12P31275 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC12P31275 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.55□□□□□ -1.52
HOXC12P31275 RPL21P5-201ENST00000554662 472 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 AC090515.3-201ENST00000560431 315 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 AC008507.3-201ENST00000585753 472 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC12P31275 TPMTP1-201ENST00000592307 737 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXC12P31275 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXC12P31275 AC078899.5-201ENST00000612475 178 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 AC025253.1-201ENST00000613623 543 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 AL359314.1-201ENST00000616913 261 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC12P31275 AC136475.10-201ENST00000620253 385 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.55□□□□□ -1.52
HOXC12P31275 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HOXC12P31275 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HOXC12P31275 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC12P31275 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
HOXC12P31275 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC12P31275 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC12P31275 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC12P31275 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC12P31275 AC107081.3-201ENST00000612715 2034 ntBASIC5.55□□□□□ -1.52
HOXC12P31275 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC12P31275 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC12P31275 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC12P31275 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC12P31275 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXC12P31275 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXC12P31275 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HOXC12P31275 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC12P31275 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC12P31275 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HOXC12P31275 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HOXC12P31275 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC12P31275 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 RNU6-921P-201ENST00000384361 107 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 HMGB1P17-201ENST00000403495 628 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 U3.43-201ENST00000410734 213 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC12P31275 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 AL109913.1-201ENST00000421173 514 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AC079355.1-201ENST00000421770 223 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 NPM1P24-201ENST00000428039 894 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 BTF3P10-201ENST00000433415 495 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AL451074.3-201ENST00000437709 472 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 MTND5P14-201ENST00000441481 1267 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AL512326.1-201ENST00000443050 721 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 MTND6P13-201ENST00000443510 523 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AC112653.1-201ENST00000443851 386 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AL589765.3-201ENST00000446084 462 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AC097463.1-201ENST00000447288 481 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 SNX18P24-201ENST00000505249 671 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC12P31275 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC12P31275 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC12P31275 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 HSPE1P3-201ENST00000559254 309 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC12P31275 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 AL133457.1-201ENST00000564251 987 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC12P31275 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC12P31275 AL391840.1-201ENST00000571144 367 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.54□□□□□ -1.52
HOXC12P31275 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC12P31275 RPSAP75-201ENST00000605848 301 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AC023813.4-201ENST00000607580 580 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC12P31275 AC092794.2-201ENST00000620933 563 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC12P31275 U6.101-201ENST00000637707 76 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.54□□□□□ -1.52
HOXC12P31275 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HOXC12P31275 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 RARSP1-201ENST00000542842 1418 ntBASIC5.54□□□□□ -1.52
HOXC12P31275 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXC12P31275 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms