Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN4P29074 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN4P29074 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN4P29074 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN4P29074 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN4P29074 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN4P29074 RNA5SP447-201ENST00000363749 119 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 SNORA71.2-201ENST00000364941 134 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 RNU1-63P-201ENST00000383902 164 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 U3.22-201ENST00000391120 215 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 RPS27AP11-201ENST00000402798 447 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN4P29074 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 UQCRBP1-201ENST00000421129 336 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN4P29074 RPS12P5-201ENST00000423449 371 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN4P29074 PRELID3BP10-201ENST00000431957 584 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN4P29074 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN4P29074 ZFAND6P1-201ENST00000434138 605 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 ARL4AP4-201ENST00000434170 518 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC073143.1-201ENST00000436316 395 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.43□□□□□ -1.7
PTPN4P29074 EEF1A1P1-201ENST00000447052 739 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN4P29074 TPMTP4-201ENST00000450749 678 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
PTPN4P29074 SCARNA10-201ENST00000459255 330 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AL672167.3-201ENST00000465951 960 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC007688.1-201ENST00000475592 759 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN4P29074 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN4P29074 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.43□□□□□ -1.7
PTPN4P29074 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN4P29074 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.43□□□□□ -1.7
PTPN4P29074 AC005242.1-201ENST00000585658 438 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC103792.1-201ENST00000603591 919 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC005191.1-201ENST00000603950 358 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN4P29074 AC110792.4-201ENST00000609843 298 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AL445423.1-201ENST00000609941 536 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC233309.1-201ENST00000619522 751 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.43□□□□□ -1.7
PTPN4P29074 AL356121.2-201ENST00000624715 780 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AL049536.1-201ENST00000625043 744 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 AC091948.2-201ENST00000636510 279 ntBASIC4.43□□□□□ -1.7
PTPN4P29074 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.43□□□□□ -1.7
PTPN4P29074 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PTPN4P29074 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 ZNF137P-201ENST00000456718 1920 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
PTPN4P29074 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
PTPN4P29074 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN4P29074 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PTPN4P29074 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 AC010300.1-201ENST00000600671 5134 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 RNU6-185P-201ENST00000384421 107 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 AL049693.1-201ENST00000402760 611 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN4P29074 RPS23P10-201ENST00000416185 486 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 RPEP3-201ENST00000425462 676 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN4P29074 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN4P29074 AC006326.1-201ENST00000445465 787 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 EIF2S2P2-201ENST00000447161 982 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 RPL7P31-201ENST00000450192 724 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 AC079168.2-201ENST00000453977 416 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN4P29074 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN4P29074 MTND2P31-201ENST00000512602 616 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.42□□□□□ -1.7
PTPN4P29074 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN4P29074 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.42□□□□□ -1.7
PTPN4P29074 TOMM20P2-201ENST00000540082 421 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN4P29074 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.42□□□□□ -1.7
PTPN4P29074 ADAD1P2-201ENST00000588476 646 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 AC073137.1-201ENST00000605636 634 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN4P29074 AL023881.1-201ENST00000621088 301 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 AC009951.1-201ENST00000623674 2614 ntBASIC4.42□□□□□ -1.7
PTPN4P29074 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.42□□□□□ -1.7
PTPN4P29074 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.42□□□□□ -1.7
PTPN4P29074 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PTPN4P29074 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PTPN4P29074 AC009501.3-201ENST00000605001 1352 ntBASIC4.41□□□□□ -1.7
PTPN4P29074 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PTPN4P29074 AC135352.1-201ENST00000506173 1418 ntBASIC4.41□□□□□ -1.7
PTPN4P29074 AC018529.3-201ENST00000624212 2254 ntBASIC4.41□□□□□ -1.7
PTPN4P29074 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.41□□□□□ -1.7
PTPN4P29074 Z98745.1-201ENST00000402553 494 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms