Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
HLA-DMAP28067 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.6□□□□□ -1.83
HLA-DMAP28067 AP005901.4-201ENST00000577336 569 ntBASIC3.6□□□□□ -1.83
HLA-DMAP28067 SS18L2P2-201ENST00000583960 235 ntBASIC3.6□□□□□ -1.83
HLA-DMAP28067 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DMAP28067 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.6□□□□□ -1.83
HLA-DMAP28067 AL031320.1-201ENST00000604177 357 ntBASIC3.6□□□□□ -1.83
HLA-DMAP28067 AC104662.1-201ENST00000604448 511 ntBASIC3.6□□□□□ -1.83
HLA-DMAP28067 AP000255.1-201ENST00000610276 676 ntBASIC3.6□□□□□ -1.83
HLA-DMAP28067 AL021997.2-201ENST00000615674 271 ntBASIC3.6□□□□□ -1.83
HLA-DMAP28067 AC007546.1-201ENST00000619452 559 ntBASIC3.6□□□□□ -1.83
HLA-DMAP28067 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DMAP28067 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC3.6□□□□□ -1.83
HLA-DMAP28067 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HLA-DMAP28067 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.6□□□□□ -1.83
HLA-DMAP28067 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HLA-DMAP28067 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HLA-DMAP28067 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DMAP28067 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DMAP28067 CR381670.1-201ENST00000624291 1693 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 RNA5SP175-201ENST00000364275 119 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DMAP28067 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HLA-DMAP28067 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 RNU4-34P-201ENST00000410431 124 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 RNA5SP498-201ENST00000411342 120 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 PRELID3BP11-201ENST00000414230 479 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 RPL31P45-201ENST00000419532 356 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 HMGB1P32-201ENST00000425971 565 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 MTCO1P52-201ENST00000433928 531 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AL132765.1-201ENST00000434165 553 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 EIF2S2P2-201ENST00000447161 982 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 TVP23BP2-201ENST00000455082 615 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 RPL7P16-201ENST00000479738 738 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 MTCO3P42-201ENST00000509488 518 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 AC110775.1-201ENST00000513721 462 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 MTCO3P39-201ENST00000514812 518 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 AC008083.2-201ENST00000546707 476 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 EDDM3DP-201ENST00000554692 434 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AL109766.1-201ENST00000555080 552 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AC007225.2-201ENST00000562529 256 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AC079587.1-201ENST00000603846 277 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AC116651.1-201ENST00000609724 556 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AC023043.4-201ENST00000612081 449 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 AL133243.1-201ENST00000614487 366 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.59□□□□□ -1.83
HLA-DMAP28067 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.59□□□□□ -1.83
HLA-DMAP28067 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
HLA-DMAP28067 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.59□□□□□ -1.84
HLA-DMAP28067 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.59□□□□□ -1.84
HLA-DMAP28067 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DMAP28067 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HLA-DMAP28067 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 SNORA51.8-201ENST00000384234 132 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 RN7SKP213-201ENST00000410746 298 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 AL355433.1-201ENST00000422804 300 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 FAR2P4-202ENST00000425399 584 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 ELOCP6-201ENST00000429066 328 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 RPL12P11-201ENST00000439970 501 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 AC092809.1-201ENST00000441469 474 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 VN1R25P-201ENST00000443385 738 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 VN1R40P-201ENST00000455196 941 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 HMGN2P7-201ENST00000456186 273 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 ELOCP12-201ENST00000458706 328 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 RPS23P1-201ENST00000491662 432 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 AC004069.2-201ENST00000505438 1114 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 SNORA70.14-201ENST00000516205 110 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 GNRHR2P1-201ENST00000555315 631 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HLA-DMAP28067 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.58□□□□□ -1.84
HLA-DMAP28067 AC099489.2-201ENST00000574976 260 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 MIR4489-201ENST00000578869 62 ntBASIC3.58□□□□□ -1.84
HLA-DMAP28067 FAM60CP-201ENST00000591086 664 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms