Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.41□□□□□ -1.86
COL8A2P25067 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.41□□□□□ -1.86
COL8A2P25067 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
COL8A2P25067 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.41□□□□□ -1.86
COL8A2P25067 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.41□□□□□ -1.86
COL8A2P25067 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 AL122126.1-201ENST00000546905 1318 ntBASIC3.41□□□□□ -1.86
COL8A2P25067 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
COL8A2P25067 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.41□□□□□ -1.86
COL8A2P25067 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.4□□□□□ -1.86
COL8A2P25067 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
COL8A2P25067 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL8A2P25067 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL8A2P25067 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.4□□□□□ -1.86
COL8A2P25067 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL8A2P25067 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
COL8A2P25067 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
COL8A2P25067 RNU6-1331P-201ENST00000363658 106 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 MIR93-201ENST00000385024 80 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
COL8A2P25067 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.4□□□□□ -1.87
COL8A2P25067 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL8A2P25067 HSPD1P16-201ENST00000402302 394 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 RPL23AP48-201ENST00000406913 488 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 PGBD4P8-201ENST00000412993 562 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.4□□□□□ -1.87
COL8A2P25067 AL590609.2-201ENST00000421430 368 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.4□□□□□ -1.87
COL8A2P25067 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.4□□□□□ -1.87
COL8A2P25067 RPL36AP13-201ENST00000457490 317 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.4□□□□□ -1.87
COL8A2P25067 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.4□□□□□ -1.87
COL8A2P25067 CCDC75P1-201ENST00000469247 791 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 GAPDHP36-201ENST00000480688 918 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.4□□□□□ -1.87
COL8A2P25067 AC006499.6-201ENST00000511169 607 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.4□□□□□ -1.87
COL8A2P25067 RNA5SP154-201ENST00000516193 111 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.4□□□□□ -1.87
COL8A2P25067 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.4□□□□□ -1.87
COL8A2P25067 AC018442.3-201ENST00000523025 183 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 DUX4L52-201ENST00000549363 777 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 AL121839.1-201ENST00000556233 1185 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.4□□□□□ -1.87
COL8A2P25067 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.4□□□□□ -1.87
COL8A2P25067 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.4□□□□□ -1.87
COL8A2P25067 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
COL8A2P25067 AC008638.3-201ENST00000603341 463 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 AC026368.1-201ENST00000614934 690 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.4□□□□□ -1.87
COL8A2P25067 AC095038.2-201ENST00000621464 1070 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 MIR4727-201ENST00000622232 55 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 AP005264.7-201ENST00000625003 745 ntBASIC3.4□□□□□ -1.87
COL8A2P25067 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
COL8A2P25067 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL8A2P25067 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
COL8A2P25067 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL8A2P25067 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL8A2P25067 AC027290.2-201ENST00000623210 18662 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 NOL8P1-201ENST00000508336 3529 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL8A2P25067 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
COL8A2P25067 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL8A2P25067 RNA5SP502-201ENST00000362694 119 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL8A2P25067 GCNT6-201ENST00000379591 934 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 SNORA48.7-201ENST00000391302 135 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL8A2P25067 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.39□□□□□ -1.87
COL8A2P25067 AC106901.1-201ENST00000425086 698 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 HMGB3P5-201ENST00000428894 612 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 OR6C71P-201ENST00000432580 913 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.39□□□□□ -1.87
COL8A2P25067 RAB9AP5-201ENST00000437794 597 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 RAB9AP2-201ENST00000443911 597 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.39□□□□□ -1.87
COL8A2P25067 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.39□□□□□ -1.87
COL8A2P25067 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.39□□□□□ -1.87
COL8A2P25067 AL162388.1-201ENST00000450912 352 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 MTND6P32-201ENST00000457611 483 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.39□□□□□ -1.87
COL8A2P25067 AC020593.1-201ENST00000507399 299 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 MTCO3P42-201ENST00000509488 518 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL8A2P25067 SAP18P1-201ENST00000512058 390 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 NDUFB4P12-201ENST00000513465 390 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 MTCO3P39-201ENST00000514812 518 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.39□□□□□ -1.87
COL8A2P25067 MTCO1P49-201ENST00000523429 802 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 MTND1P6-201ENST00000523621 946 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.39□□□□□ -1.87
COL8A2P25067 MED28P5-201ENST00000528254 438 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
COL8A2P25067 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.39□□□□□ -1.87
COL8A2P25067 AC025423.2-201ENST00000537570 439 ntBASIC3.39□□□□□ -1.87
COL8A2P25067 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.39□□□□□ -1.87
COL8A2P25067 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms