Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.83□□□□□ -1.64
CAPN3P20807 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.83□□□□□ -1.64
CAPN3P20807 AC087897.1-201ENST00000550134 156 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 EDDM3DP-201ENST00000554692 434 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 EIF5A2P1-201ENST00000564027 460 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AC074051.3-201ENST00000570238 358 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 CYCSP40-201ENST00000575927 294 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AC095055.1-201ENST00000603472 1113 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AC073387.2-201ENST00000604797 784 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 AC099676.1-201ENST00000608886 657 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 VN1R7P-201ENST00000619242 903 ntBASIC4.83□□□□□ -1.64
CAPN3P20807 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.83□□□□□ -1.64
CAPN3P20807 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.83□□□□□ -1.64
CAPN3P20807 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CAPN3P20807 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CAPN3P20807 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CAPN3P20807 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CAPN3P20807 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CAPN3P20807 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 AC126323.6-202ENST00000568092 3511 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.82□□□□□ -1.64
CAPN3P20807 RNU6-298P-201ENST00000390888 96 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CAPN3P20807 AL121978.1-201ENST00000402778 359 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 MIR1182-201ENST00000408363 97 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN3P20807 RPS12P23-201ENST00000419579 400 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 USP9YP21-201ENST00000420603 432 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AC092634.2-201ENST00000428146 1010 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 USP9YP9-201ENST00000429406 715 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.82□□□□□ -1.64
CAPN3P20807 HSFY7P-201ENST00000432672 318 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AC091390.1-201ENST00000433904 331 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 HSFY8P-201ENST00000437934 318 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AL450023.3-201ENST00000440592 271 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN3P20807 RAB11AP1-201ENST00000442978 646 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AL031584.1-201ENST00000447169 754 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.82□□□□□ -1.64
CAPN3P20807 AC009963.2-201ENST00000453431 138 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 HSFY5P-201ENST00000453726 309 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 RN7SL346P-201ENST00000491561 294 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 PRELID3BP5-201ENST00000508612 460 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 AC048346.1-201ENST00000510247 144 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CAPN3P20807 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
CAPN3P20807 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CAPN3P20807 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN3P20807 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CAPN3P20807 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN3P20807 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN3P20807 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.82□□□□□ -1.64
CAPN3P20807 MIR4666A-201ENST00000580160 79 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 RN7SL52P-201ENST00000584271 284 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CAPN3P20807 AC090330.1-201ENST00000588646 764 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.82□□□□□ -1.64
CAPN3P20807 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CAPN3P20807 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.82□□□□□ -1.64
CAPN3P20807 AC007566.2-201ENST00000603642 413 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 IMMP1LP1-201ENST00000605170 488 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AL158050.2-201ENST00000605336 568 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 FAM25E-202ENST00000608562 189 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AP000238.1-201ENST00000608759 426 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 MIR8069-1-201ENST00000616627 86 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 RN7SL722P-201ENST00000617780 284 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 RN7SL565P-201ENST00000618246 284 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 AC022306.3-201ENST00000619930 550 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 MIR8069-2-201ENST00000621412 86 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.82□□□□□ -1.64
CAPN3P20807 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.82□□□□□ -1.64
CAPN3P20807 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CAPN3P20807 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CAPN3P20807 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CAPN3P20807 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.82□□□□□ -1.64
CAPN3P20807 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CAPN3P20807 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CAPN3P20807 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CAPN3P20807 ELL2P4-201ENST00000446870 1376 ntBASIC4.81□□□□□ -1.64
CAPN3P20807 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CAPN3P20807 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CAPN3P20807 HMGB1P5-201ENST00000255320 642 ntBASIC4.81□□□□□ -1.64
CAPN3P20807 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms