Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MRPL57P6-201ENST00000506570 309 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 Y_RNA.691-201ENST00000516611 103 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 SCARNA6.1-201ENST00000516989 238 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AC107953.1-201ENST00000522216 297 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC6.41□□□□□ -1.38
NFKB1P19838 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.41□□□□□ -1.38
NFKB1P19838 AC068714.1-201ENST00000559623 800 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 OR4H6P-201ENST00000563771 921 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AC090751.1-201ENST00000566966 267 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 MIR3157-201ENST00000578688 85 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.41□□□□□ -1.38
NFKB1P19838 AC027229.1-201ENST00000583887 253 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.41□□□□□ -1.38
NFKB1P19838 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.41□□□□□ -1.38
NFKB1P19838 AC063977.7-201ENST00000594454 337 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.41□□□□□ -1.38
NFKB1P19838 AC006924.1-201ENST00000610750 559 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AL080312.2-201ENST00000613001 630 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 AC089999.3-201ENST00000622440 577 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.41□□□□□ -1.38
NFKB1P19838 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.41□□□□□ -1.38
NFKB1P19838 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
NFKB1P19838 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.41□□□□□ -1.38
NFKB1P19838 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
NFKB1P19838 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.41□□□□□ -1.38
NFKB1P19838 RNF6P1-201ENST00000444889 1784 ntBASIC6.41□□□□□ -1.38
NFKB1P19838 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
NFKB1P19838 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
NFKB1P19838 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.4□□□□□ -1.38
NFKB1P19838 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.4□□□□□ -1.38
NFKB1P19838 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NFKB1P19838 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NFKB1P19838 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NFKB1P19838 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
NFKB1P19838 Y_RNA.184-201ENST00000363884 108 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 RNU6-289P-201ENST00000364093 107 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 SNORD42.2-201ENST00000365570 69 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 RNU6-1151P-201ENST00000384684 107 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 RNU1-149P-201ENST00000390870 161 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 RPL7P25-201ENST00000404151 721 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 RN7SKP240-201ENST00000410583 375 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 AC073136.2-201ENST00000417282 849 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 MTCYBP8-201ENST00000422855 651 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 AC018630.2-202ENST00000422992 927 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 OSTCP4-201ENST00000424397 449 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 AC245291.3-201ENST00000443400 292 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 AL136380.1-201ENST00000447970 162 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.4□□□□□ -1.38
NFKB1P19838 HIGD1AP8-201ENST00000453927 274 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.4□□□□□ -1.38
NFKB1P19838 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 AC098583.1-201ENST00000480875 255 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 AC010343.2-201ENST00000510162 224 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 RNU6-1170P-201ENST00000515974 106 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 RNA5SP400-201ENST00000517155 111 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 AC009117.1-201ENST00000563948 554 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NFKB1P19838 AC078899.5-201ENST00000612475 178 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
NFKB1P19838 AC233309.1-201ENST00000619522 751 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 AL356585.4-201ENST00000623078 1229 ntBASIC6.4□□□□□ -1.38
NFKB1P19838 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.4□□□□□ -1.38
NFKB1P19838 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.4□□□□□ -1.38
NFKB1P19838 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.4□□□□□ -1.38
NFKB1P19838 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
NFKB1P19838 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.4□□□□□ -1.39
NFKB1P19838 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.4□□□□□ -1.39
NFKB1P19838 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
NFKB1P19838 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NFKB1P19838 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.4□□□□□ -1.39
NFKB1P19838 AL121950.1-201ENST00000624993 2077 ntBASIC6.4□□□□□ -1.39
NFKB1P19838 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NFKB1P19838 AC079753.1-201ENST00000623243 3868 ntBASIC6.4□□□□□ -1.39
NFKB1P19838 AOX3P-204ENST00000491025 2107 ntBASIC6.4□□□□□ -1.39
NFKB1P19838 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
NFKB1P19838 AC130360.2-201ENST00000533477 1556 ntBASIC6.4□□□□□ -1.39
NFKB1P19838 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
NFKB1P19838 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms