Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SNORD121B-201ENST00000458838 81 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AC053481.1-201ENST00000467217 306 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AL139099.1-201ENST00000497398 403 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 ARL4AP2-201ENST00000507378 601 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC5.53□□□□□ -1.52
ATF4P18848 RN7SKP116-201ENST00000516902 319 ntBASIC5.53□□□□□ -1.52
ATF4P18848 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.53□□□□□ -1.52
ATF4P18848 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC5.53□□□□□ -1.52
ATF4P18848 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 RGS5-220ENST00000528689 566 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 AC109635.3-201ENST00000529536 185 ntBASIC5.53□□□□□ -1.52
ATF4P18848 OR4P1P-201ENST00000530808 1136 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AP003385.6-201ENST00000531603 374 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 OR5AN2P-201ENST00000534535 896 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.53□□□□□ -1.52
ATF4P18848 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
ATF4P18848 HAUS8P1-201ENST00000549005 542 ntBASIC5.53□□□□□ -1.52
ATF4P18848 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC5.53□□□□□ -1.52
ATF4P18848 AL512360.1-201ENST00000555346 234 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.53□□□□□ -1.52
ATF4P18848 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 RN7SL835P-201ENST00000579920 262 ntBASIC5.53□□□□□ -1.52
ATF4P18848 MIR3146-201ENST00000580367 79 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC5.53□□□□□ -1.52
ATF4P18848 EXOSC3P2-201ENST00000594464 497 ntBASIC5.53□□□□□ -1.52
ATF4P18848 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC5.53□□□□□ -1.52
ATF4P18848 AL357078.3-201ENST00000607528 618 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AC010424.2-201ENST00000607594 443 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AC017083.3-201ENST00000609955 700 ntBASIC5.53□□□□□ -1.52
ATF4P18848 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 AC027506.1-201ENST00000621395 198 ntBASIC5.53□□□□□ -1.52
ATF4P18848 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 uc_338.21-201ENST00000622458 147 ntBASIC5.53□□□□□ -1.52
ATF4P18848 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 AC110769.3-201ENST00000624567 1173 ntBASIC5.53□□□□□ -1.52
ATF4P18848 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
ATF4P18848 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.53□□□□□ -1.52
ATF4P18848 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.53□□□□□ -1.52
ATF4P18848 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
ATF4P18848 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
ATF4P18848 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATF4P18848 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATF4P18848 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATF4P18848 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 AL512353.3-201ENST00000417517 1326 ntBASIC5.52□□□□□ -1.53
ATF4P18848 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ATF4P18848 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATF4P18848 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATF4P18848 AL592437.2-201ENST00000421655 2434 ntBASIC5.52□□□□□ -1.53
ATF4P18848 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
ATF4P18848 RN7SKP36-201ENST00000363997 312 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 AC074375.1-201ENST00000372993 192 ntBASIC5.52□□□□□ -1.53
ATF4P18848 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 RNY3P14-201ENST00000384309 102 ntBASIC5.52□□□□□ -1.53
ATF4P18848 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ATF4P18848 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ATF4P18848 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC5.52□□□□□ -1.53
ATF4P18848 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 RN7SKP225-201ENST00000410405 352 ntBASIC5.52□□□□□ -1.53
ATF4P18848 HMGN1P24-201ENST00000412282 298 ntBASIC5.52□□□□□ -1.53
ATF4P18848 RPL12P10-201ENST00000413498 498 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
ATF4P18848 USP9YP27-201ENST00000418455 438 ntBASIC5.52□□□□□ -1.53
ATF4P18848 RPS15AP12-201ENST00000419498 388 ntBASIC5.52□□□□□ -1.53
ATF4P18848 ELOCP4-201ENST00000420090 333 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC009480.2-201ENST00000422916 432 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.52□□□□□ -1.53
ATF4P18848 NEK4P1-201ENST00000433383 879 ntBASIC5.52□□□□□ -1.53
ATF4P18848 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ATF4P18848 AL731892.1-201ENST00000437364 1192 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC006335.2-201ENST00000437993 330 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC093156.1-201ENST00000440382 670 ntBASIC5.52□□□□□ -1.53
ATF4P18848 CNOT7P2-201ENST00000441051 832 ntBASIC5.52□□□□□ -1.53
ATF4P18848 RPL23AP20-201ENST00000447965 421 ntBASIC5.52□□□□□ -1.53
ATF4P18848 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.52□□□□□ -1.53
ATF4P18848 snoU109.4-201ENST00000458953 143 ntBASIC5.52□□□□□ -1.53
ATF4P18848 RPL38P1-201ENST00000460914 211 ntBASIC5.52□□□□□ -1.53
ATF4P18848 CBX5P1-201ENST00000468470 561 ntBASIC5.52□□□□□ -1.53
ATF4P18848 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.52□□□□□ -1.53
ATF4P18848 AC018475.1-201ENST00000478358 465 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC106760.2-201ENST00000504159 619 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC107934.1-201ENST00000522215 217 ntBASIC5.52□□□□□ -1.53
ATF4P18848 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.52□□□□□ -1.53
ATF4P18848 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.52□□□□□ -1.53
ATF4P18848 AP004607.5-201ENST00000532034 217 ntBASIC5.52□□□□□ -1.53
ATF4P18848 OR8L1P-201ENST00000534005 955 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms