Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCL3L1P16619 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CCL3L1P16619 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL3L1P16619 U1.1-201ENST00000384101 164 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL3L1P16619 ZNF602P-201ENST00000405929 924 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 RNA5SP39-201ENST00000411245 120 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.14□□□□□ -1.91
CCL3L1P16619 AL391219.1-201ENST00000422570 483 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.14□□□□□ -1.91
CCL3L1P16619 AL500522.2-201ENST00000448562 343 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 AL591623.2-201ENST00000449978 222 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL3L1P16619 SEPT14P1-201ENST00000458703 648 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 RN7SL132P-201ENST00000478131 296 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 AC146944.2-203ENST00000502493 354 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.14□□□□□ -1.91
CCL3L1P16619 AC139495.1-202ENST00000513164 354 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL3L1P16619 SCARNA14-201ENST00000516903 136 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL3L1P16619 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.14□□□□□ -1.91
CCL3L1P16619 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL3L1P16619 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.14□□□□□ -1.91
CCL3L1P16619 CYCSP30-201ENST00000546447 172 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.14□□□□□ -1.91
CCL3L1P16619 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.14□□□□□ -1.91
CCL3L1P16619 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.14□□□□□ -1.91
CCL3L1P16619 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.14□□□□□ -1.91
CCL3L1P16619 AL354760.1-201ENST00000608357 643 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 AC090912.3-201ENST00000609775 533 ntBASIC3.14□□□□□ -1.91
CCL3L1P16619 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCL3L1P16619 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CCL3L1P16619 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCL3L1P16619 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.14□□□□□ -1.91
CCL3L1P16619 CASC19-255ENST00000641733 1385 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AC005332.5-201ENST00000591222 2919 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCL3L1P16619 AC026951.1-201ENST00000559530 2459 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
CCL3L1P16619 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCL3L1P16619 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCL3L1P16619 OR4A15-201ENST00000314706 1035 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCL3L1P16619 RPL32P23-201ENST00000397237 405 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 SNORA3.3-201ENST00000408712 125 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 RNU2-22P-201ENST00000411266 212 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.13□□□□□ -1.91
CCL3L1P16619 TCEA1P4-201ENST00000415066 844 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AC010740.1-201ENST00000417035 684 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 MTND2P15-201ENST00000418575 892 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCL3L1P16619 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.13□□□□□ -1.91
CCL3L1P16619 SNORA71B-202ENST00000439232 272 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AL451050.1-201ENST00000450126 415 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AC084198.1-201ENST00000477747 402 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 TRBV12-2-201ENST00000489763 344 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.13□□□□□ -1.91
CCL3L1P16619 AC109458.1-201ENST00000508858 316 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.13□□□□□ -1.91
CCL3L1P16619 AC010342.1-201ENST00000514047 877 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 MTND4LP31-201ENST00000514859 294 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.13□□□□□ -1.91
CCL3L1P16619 AC093853.1-201ENST00000515689 483 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.13□□□□□ -1.91
CCL3L1P16619 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.13□□□□□ -1.91
CCL3L1P16619 AC106785.1-201ENST00000565935 262 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AC087499.8-201ENST00000578406 226 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.13□□□□□ -1.91
CCL3L1P16619 AC012557.1-201ENST00000607115 611 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.13□□□□□ -1.91
CCL3L1P16619 AC005344.1-201ENST00000613391 459 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 AC079684.1-201ENST00000621405 437 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.13□□□□□ -1.91
CCL3L1P16619 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.13□□□□□ -1.91
CCL3L1P16619 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCL3L1P16619 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.13□□□□□ -1.91
CCL3L1P16619 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.13□□□□□ -1.91
CCL3L1P16619 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCL3L1P16619 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCL3L1P16619 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.13□□□□□ -1.91
CCL3L1P16619 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCL3L1P16619 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCL3L1P16619 AC018555.1-201ENST00000567548 1980 ntBASIC3.12□□□□□ -1.91
CCL3L1P16619 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.12□□□□□ -1.91
CCL3L1P16619 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCL3L1P16619 KPNA2P2-201ENST00000419546 1489 ntBASIC3.12□□□□□ -1.91
CCL3L1P16619 AP004289.2-201ENST00000444413 1457 ntBASIC3.12□□□□□ -1.91
CCL3L1P16619 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCL3L1P16619 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCL3L1P16619 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCL3L1P16619 RNU4-44P-201ENST00000363050 141 ntBASIC3.12□□□□□ -1.91
CCL3L1P16619 Y_RNA.126-201ENST00000363382 111 ntBASIC3.12□□□□□ -1.91
CCL3L1P16619 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCL3L1P16619 HLFP1-201ENST00000402375 499 ntBASIC3.12□□□□□ -1.91
CCL3L1P16619 AC233289.1-201ENST00000403700 508 ntBASIC3.12□□□□□ -1.91
CCL3L1P16619 RN7SKP156-201ENST00000410308 342 ntBASIC3.12□□□□□ -1.91
CCL3L1P16619 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms