Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC073850.1-201ENST00000449243 255 ntBASIC4.72□□□□□ -1.65
PCNAP12004 CYCSP34-201ENST00000458172 304 ntBASIC4.72□□□□□ -1.65
PCNAP12004 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.72□□□□□ -1.65
PCNAP12004 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.72□□□□□ -1.65
PCNAP12004 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.72□□□□□ -1.65
PCNAP12004 MTCYBP35-201ENST00000503630 1137 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.72□□□□□ -1.65
PCNAP12004 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.72□□□□□ -1.65
PCNAP12004 ENPP7P9-201ENST00000514456 627 ntBASIC4.72□□□□□ -1.65
PCNAP12004 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.72□□□□□ -1.65
PCNAP12004 DEFB130C-202ENST00000530001 230 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.72□□□□□ -1.65
PCNAP12004 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 AC068714.1-201ENST00000559623 800 ntBASIC4.72□□□□□ -1.65
PCNAP12004 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.72□□□□□ -1.65
PCNAP12004 RN7SL753P-201ENST00000581238 290 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.72□□□□□ -1.65
PCNAP12004 AC022022.2-201ENST00000602989 360 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AC123786.2-201ENST00000603459 275 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AC087783.2-201ENST00000605070 562 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AC097505.1-201ENST00000610199 565 ntBASIC4.72□□□□□ -1.65
PCNAP12004 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.72□□□□□ -1.65
PCNAP12004 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AL158196.1-201ENST00000616786 434 ntBASIC4.72□□□□□ -1.65
PCNAP12004 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AL158163.2-201ENST00000619110 700 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AC017104.5-201ENST00000637647 639 ntBASIC4.72□□□□□ -1.65
PCNAP12004 NSRP1P1-201ENST00000444067 1693 ntBASIC4.72□□□□□ -1.65
PCNAP12004 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.72□□□□□ -1.65
PCNAP12004 AC138393.1-206ENST00000540997 1886 ntBASIC4.72□□□□□ -1.65
PCNAP12004 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.72□□□□□ -1.65
PCNAP12004 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.72□□□□□ -1.65
PCNAP12004 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.72□□□□□ -1.65
PCNAP12004 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.72□□□□□ -1.65
PCNAP12004 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
PCNAP12004 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCNAP12004 RARSP1-201ENST00000542842 1418 ntBASIC4.72□□□□□ -1.65
PCNAP12004 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.72□□□□□ -1.65
PCNAP12004 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCNAP12004 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCNAP12004 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.71□□□□□ -1.65
PCNAP12004 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCNAP12004 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
PCNAP12004 PNPT1P2-201ENST00000456768 2050 ntBASIC4.71□□□□□ -1.65
PCNAP12004 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.71□□□□□ -1.66
PCNAP12004 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCNAP12004 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCNAP12004 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCNAP12004 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.71□□□□□ -1.66
PCNAP12004 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
PCNAP12004 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCNAP12004 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCNAP12004 RNU6-549P-201ENST00000384433 107 ntBASIC4.71□□□□□ -1.66
PCNAP12004 MIR765-201ENST00000390226 114 ntBASIC4.71□□□□□ -1.66
PCNAP12004 RNU6-77P-201ENST00000410554 91 ntBASIC4.71□□□□□ -1.66
PCNAP12004 RN7SKP213-201ENST00000410746 298 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 RPL6P29-201ENST00000414863 865 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 DYNLL1P7-201ENST00000429273 258 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.71□□□□□ -1.66
PCNAP12004 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.71□□□□□ -1.66
PCNAP12004 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.71□□□□□ -1.66
PCNAP12004 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.71□□□□□ -1.66
PCNAP12004 YWHAQP9-201ENST00000445891 512 ntBASIC4.71□□□□□ -1.66
PCNAP12004 NPM1P13-201ENST00000452663 865 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 AC005410.1-202ENST00000460347 485 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.71□□□□□ -1.66
PCNAP12004 RN7SL727P-201ENST00000482164 296 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC073522.1-201ENST00000483312 377 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC140172.1-201ENST00000502928 141 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCNAP12004 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
PCNAP12004 RNA5SP497-201ENST00000516081 97 ntBASIC4.71□□□□□ -1.66
PCNAP12004 RNU6-416P-201ENST00000516265 103 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 IGKV2-36-201ENST00000519999 223 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 IGJP1-201ENST00000522682 475 ntBASIC4.71□□□□□ -1.66
PCNAP12004 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.71□□□□□ -1.66
PCNAP12004 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.71□□□□□ -1.66
PCNAP12004 AC139103.1-201ENST00000534696 1030 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.71□□□□□ -1.66
PCNAP12004 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.71□□□□□ -1.66
PCNAP12004 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PCNAP12004 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.71□□□□□ -1.66
PCNAP12004 AC023813.2-201ENST00000564321 469 ntBASIC4.71□□□□□ -1.66
PCNAP12004 AC018552.3-201ENST00000567416 561 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms