Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RN7SKP177-201ENST00000410567 355 ntBASIC6.57□□□□□ -1.36
TOP2AP11388 OR51A6P-201ENST00000418680 1004 ntBASIC6.57□□□□□ -1.36
TOP2AP11388 DPY19L1P2-201ENST00000426647 915 ntBASIC6.57□□□□□ -1.36
TOP2AP11388 AC005300.1-201ENST00000428401 373 ntBASIC6.57□□□□□ -1.36
TOP2AP11388 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC6.57□□□□□ -1.36
TOP2AP11388 BX510359.1-201ENST00000456973 237 ntBASIC6.57□□□□□ -1.36
TOP2AP11388 BTG4P1-201ENST00000510421 183 ntBASIC6.57□□□□□ -1.36
TOP2AP11388 AC021146.3-201ENST00000511911 260 ntBASIC6.57□□□□□ -1.36
TOP2AP11388 CYP4A43P-201ENST00000568156 121 ntBASIC6.57□□□□□ -1.36
TOP2AP11388 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC6.57□□□□□ -1.36
TOP2AP11388 AC133552.5-201ENST00000604266 540 ntBASIC6.57□□□□□ -1.36
TOP2AP11388 AC005000.2-201ENST00000605468 310 ntBASIC6.57□□□□□ -1.36
TOP2AP11388 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.57□□□□□ -1.36
TOP2AP11388 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
TOP2AP11388 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TOP2AP11388 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC6.57□□□□□ -1.36
TOP2AP11388 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP2AP11388 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP2AP11388 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TOP2AP11388 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
TOP2AP11388 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
TOP2AP11388 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC6.57□□□□□ -1.36
TOP2AP11388 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
TOP2AP11388 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TOP2AP11388 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TOP2AP11388 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TOP2AP11388 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.56□□□□□ -1.36
TOP2AP11388 AC234772.1-201ENST00000377927 937 ntBASIC6.56□□□□□ -1.36
TOP2AP11388 DBIP2-201ENST00000419076 262 ntBASIC6.56□□□□□ -1.36
TOP2AP11388 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.56□□□□□ -1.36
TOP2AP11388 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.56□□□□□ -1.36
TOP2AP11388 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TOP2AP11388 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.56□□□□□ -1.36
TOP2AP11388 AP000563.1-201ENST00000490865 758 ntBASIC6.56□□□□□ -1.36
TOP2AP11388 AC090877.1-201ENST00000561418 344 ntBASIC6.56□□□□□ -1.36
TOP2AP11388 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.56□□□□□ -1.36
TOP2AP11388 AL591424.2-201ENST00000617023 128 ntBASIC6.56□□□□□ -1.36
TOP2AP11388 AP001002.2-201ENST00000625137 386 ntBASIC6.56□□□□□ -1.36
TOP2AP11388 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
TOP2AP11388 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
TOP2AP11388 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
TOP2AP11388 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
TOP2AP11388 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.56□□□□□ -1.36
TOP2AP11388 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TOP2AP11388 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.56□□□□□ -1.36
TOP2AP11388 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
TOP2AP11388 UBE3AP2-201ENST00000429033 2259 ntBASIC6.56□□□□□ -1.36
TOP2AP11388 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
TOP2AP11388 EIF4EBP2P3-201ENST00000403144 334 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 HDGFP1-201ENST00000405943 252 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 AC097713.2-201ENST00000430199 356 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
TOP2AP11388 AC026784.1-201ENST00000507986 352 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.55□□□□□ -1.36
TOP2AP11388 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.55□□□□□ -1.36
TOP2AP11388 AL133247.2-201ENST00000603236 482 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 AL390816.3-201ENST00000604527 1066 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.55□□□□□ -1.36
TOP2AP11388 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
TOP2AP11388 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.55□□□□□ -1.36
TOP2AP11388 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP2AP11388 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP2AP11388 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TOP2AP11388 AL365440.1-201ENST00000436135 2167 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 AC010300.1-201ENST00000600671 5134 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
TOP2AP11388 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
TOP2AP11388 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.55□□□□□ -1.36
TOP2AP11388 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.55□□□□□ -1.36
TOP2AP11388 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.55□□□□□ -1.36
TOP2AP11388 SNORA59A-201ENST00000459326 152 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
TOP2AP11388 AC017037.1-201ENST00000508460 471 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.55□□□□□ -1.36
TOP2AP11388 AC069240.1-201ENST00000548774 375 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 AC107016.1-201ENST00000550463 337 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP2AP11388 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.55□□□□□ -1.36
TOP2AP11388 AC106782.4-201ENST00000568264 210 ntBASIC6.55□□□□□ -1.36
TOP2AP11388 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
TOP2AP11388 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TOP2AP11388 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
TOP2AP11388 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP2AP11388 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
TOP2AP11388 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.54□□□□□ -1.36
TOP2AP11388 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.54□□□□□ -1.36
TOP2AP11388 NPM1P25-201ENST00000429734 854 ntBASIC6.54□□□□□ -1.36
TOP2AP11388 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.54□□□□□ -1.36
TOP2AP11388 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC6.54□□□□□ -1.36
TOP2AP11388 AC008011.1-201ENST00000545989 227 ntBASIC6.54□□□□□ -1.36
TOP2AP11388 MTND6P33-201ENST00000571794 183 ntBASIC6.54□□□□□ -1.36
TOP2AP11388 AP000255.1-201ENST00000610276 676 ntBASIC6.54□□□□□ -1.36
TOP2AP11388 MIR8058-201ENST00000615737 89 ntBASIC6.54□□□□□ -1.36
TOP2AP11388 ATE1-AS1-202ENST00000636460 506 ntBASIC6.54□□□□□ -1.36
TOP2AP11388 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP2AP11388 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
TOP2AP11388 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC6.54□□□□□ -1.36
TOP2AP11388 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.53□□□□□ -1.36
TOP2AP11388 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
TOP2AP11388 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms