Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 MTND3P19-201ENST00000603825 345 ntBASIC5.89□□□□□ -1.47
SNRPA1P09661 AC122108.2-201ENST00000611946 526 ntBASIC5.89□□□□□ -1.47
SNRPA1P09661 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNRPA1P09661 AC009318.3-201ENST00000616916 503 ntBASIC5.89□□□□□ -1.47
SNRPA1P09661 AC009704.2-201ENST00000618739 483 ntBASIC5.89□□□□□ -1.47
SNRPA1P09661 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.89□□□□□ -1.47
SNRPA1P09661 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.89□□□□□ -1.47
SNRPA1P09661 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SNRPA1P09661 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.89□□□□□ -1.47
SNRPA1P09661 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SNRPA1P09661 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AC007342.7-201ENST00000624610 2337 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 AC233289.1-201ENST00000403700 508 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AL136310.1-201ENST00000404926 654 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 MIR1302-8-201ENST00000408342 128 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AL008987.1-201ENST00000415528 237 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 AC090960.1-201ENST00000421072 306 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AP001324.1-201ENST00000428553 399 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.88□□□□□ -1.47
SNRPA1P09661 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.88□□□□□ -1.47
SNRPA1P09661 PTGES3P1-201ENST00000439531 483 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 CDY12P-201ENST00000440679 1015 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 CDY13P-201ENST00000445813 1015 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.88□□□□□ -1.47
SNRPA1P09661 RPS6P2-201ENST00000454208 705 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.88□□□□□ -1.47
SNRPA1P09661 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AC109327.1-201ENST00000471666 403 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AC128716.1-201ENST00000475129 166 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AC098583.1-201ENST00000480875 255 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AC008837.1-201ENST00000511513 412 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 RNA5SP249-201ENST00000516127 99 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 RN7SKP141-201ENST00000516167 338 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AC104417.1-201ENST00000523974 751 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AC023575.1-201ENST00000580510 358 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AC020910.2-201ENST00000603635 610 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AL133507.1-201ENST00000605269 557 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.88□□□□□ -1.47
SNRPA1P09661 MIR6716-201ENST00000613413 80 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AC010975.3-201ENST00000618727 978 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 AC015804.1-201ENST00000622935 435 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SNRPA1P09661 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.88□□□□□ -1.47
SNRPA1P09661 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.88□□□□□ -1.47
SNRPA1P09661 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SNRPA1P09661 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.88□□□□□ -1.47
SNRPA1P09661 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.88□□□□□ -1.47
SNRPA1P09661 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SNRPA1P09661 AC100778.3-201ENST00000580060 1750 ntBASIC5.88□□□□□ -1.47
SNRPA1P09661 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SNRPA1P09661 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SNRPA1P09661 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNRPA1P09661 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNRPA1P09661 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
SNRPA1P09661 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
SNRPA1P09661 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNRPA1P09661 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNRPA1P09661 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNRPA1P09661 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNRPA1P09661 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.87□□□□□ -1.47
SNRPA1P09661 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 RNU6-224P-201ENST00000384055 107 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 RNU4-74P-201ENST00000411280 161 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 HSFY4P-201ENST00000415994 1181 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 TMSB10P2-201ENST00000416049 131 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 AC023128.2-201ENST00000420880 1223 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.87□□□□□ -1.47
SNRPA1P09661 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.87□□□□□ -1.47
SNRPA1P09661 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.87□□□□□ -1.47
SNRPA1P09661 THAP5P1-201ENST00000439089 262 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 AC068135.1-201ENST00000446164 246 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 PTENP1-201ENST00000447117 1215 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 AL157827.1-201ENST00000447622 132 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNRPA1P09661 GTF2IP12-201ENST00000456547 356 ntBASIC5.87□□□□□ -1.47
SNRPA1P09661 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms