Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC108064.1-201ENST00000513791 460 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC6P09630 AC087894.1-201ENST00000538359 518 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC6P09630 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC6P09630 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC6P09630 AL132857.1-201ENST00000555180 708 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC6P09630 AP000919.1-202ENST00000581139 1264 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 RN7SL600P-201ENST00000581811 299 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC6P09630 AC002069.2-201ENST00000603580 883 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 RPP40P2-201ENST00000603596 712 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 RNU6-1192P-201ENST00000612197 107 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 RNU6-489P-201ENST00000618289 107 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 AC006386.1-201ENST00000619436 415 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 THAP12P5-201ENST00000405864 2275 ntBASIC5.03□□□□□ -1.6
HOXC6P09630 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC6P09630 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HOXC6P09630 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HOXC6P09630 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC6P09630 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
HOXC6P09630 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
HOXC6P09630 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC6P09630 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
HOXC6P09630 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 MIR372-201ENST00000362225 67 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 EI24P3-201ENST00000399046 1062 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 AL592291.1-201ENST00000403830 352 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 MTCO2P21-201ENST00000419780 677 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 AC241520.1-201ENST00000422654 1099 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC6P09630 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXC6P09630 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC6P09630 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC6P09630 RPL23AP52-201ENST00000439311 478 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 MED6P1-201ENST00000439659 713 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC6P09630 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC6P09630 HMGB1P26-201ENST00000452520 628 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 RPL5P32-201ENST00000454085 879 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 CYCSP20-201ENST00000473154 315 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 RN7SL812P-201ENST00000493791 279 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 AC005351.1-201ENST00000511152 786 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC6P09630 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC6P09630 SNORA67.7-201ENST00000516664 135 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXC6P09630 AC010376.1-201ENST00000522101 334 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 MTCO1P49-201ENST00000523429 802 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC6P09630 LSM3P2-201ENST00000551246 273 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC6P09630 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXC6P09630 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC6P09630 AC008751.2-201ENST00000597885 980 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 AL022067.1-201ENST00000602426 454 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 AC015849.2-201ENST00000605738 409 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC6P09630 OR5AC4P-202ENST00000642086 985 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC6P09630 AC012321.1-201ENST00000561622 1588 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 AC000374.1-201ENST00000434698 1745 ntBASIC5.02□□□□□ -1.61
HOXC6P09630 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC6P09630 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC6P09630 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC6P09630 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC6P09630 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC6P09630 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
HOXC6P09630 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC6P09630 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC6P09630 RNU1-83P-201ENST00000363426 164 ntBASIC5.01□□□□□ -1.61
HOXC6P09630 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC6P09630 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC6P09630 AL080315.1-201ENST00000406055 466 ntBASIC5.01□□□□□ -1.61
HOXC6P09630 AL355615.1-201ENST00000406187 641 ntBASIC5.01□□□□□ -1.61
HOXC6P09630 FCF1P5-201ENST00000406490 482 ntBASIC5.01□□□□□ -1.61
HOXC6P09630 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC6P09630 XKRYP1-201ENST00000423438 492 ntBASIC5.01□□□□□ -1.61
HOXC6P09630 RPL21P43-201ENST00000425440 472 ntBASIC5.01□□□□□ -1.61
HOXC6P09630 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC6P09630 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC6P09630 XKRYP2-201ENST00000432915 492 ntBASIC5.01□□□□□ -1.61
HOXC6P09630 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC6P09630 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.01□□□□□ -1.61
HOXC6P09630 RPL7P55-201ENST00000450522 746 ntBASIC5.01□□□□□ -1.61
HOXC6P09630 VN1R32P-201ENST00000452234 905 ntBASIC5.01□□□□□ -1.61
HOXC6P09630 AC104629.2-201ENST00000468627 598 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms