Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTSDP07339 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTSDP07339 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.32□□□□□ -1.88
CTSDP07339 SNORA60-201ENST00000362396 134 ntBASIC3.32□□□□□ -1.88
CTSDP07339 RNA5SP447-201ENST00000363749 119 ntBASIC3.32□□□□□ -1.88
CTSDP07339 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTSDP07339 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CTSDP07339 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTSDP07339 RN7SKP182-201ENST00000410772 298 ntBASIC3.32□□□□□ -1.88
CTSDP07339 SEC63P1-201ENST00000425785 1258 ntBASIC3.32□□□□□ -1.88
CTSDP07339 RPS26P40-201ENST00000435209 294 ntBASIC3.32□□□□□ -1.88
CTSDP07339 HMGB1P37-201ENST00000439613 609 ntBASIC3.32□□□□□ -1.88
CTSDP07339 Z95152.1-201ENST00000453556 656 ntBASIC3.32□□□□□ -1.88
CTSDP07339 RN7SL459P-201ENST00000481078 302 ntBASIC3.32□□□□□ -1.88
CTSDP07339 AC013356.1-201ENST00000489027 564 ntBASIC3.32□□□□□ -1.88
CTSDP07339 RPS27AP16-201ENST00000492222 470 ntBASIC3.32□□□□□ -1.88
CTSDP07339 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.32□□□□□ -1.88
CTSDP07339 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.32□□□□□ -1.88
CTSDP07339 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.32□□□□□ -1.88
CTSDP07339 RNU6-943P-201ENST00000516960 98 ntBASIC3.32□□□□□ -1.88
CTSDP07339 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.32□□□□□ -1.88
CTSDP07339 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.32□□□□□ -1.88
CTSDP07339 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.32□□□□□ -1.88
CTSDP07339 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.32□□□□□ -1.88
CTSDP07339 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.32□□□□□ -1.88
CTSDP07339 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.32□□□□□ -1.88
CTSDP07339 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.32□□□□□ -1.88
CTSDP07339 AC090948.1-201ENST00000607464 549 ntBASIC3.32□□□□□ -1.88
CTSDP07339 AL158062.1-201ENST00000619632 745 ntBASIC3.32□□□□□ -1.88
CTSDP07339 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.32□□□□□ -1.88
CTSDP07339 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
CTSDP07339 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.32□□□□□ -1.88
CTSDP07339 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTSDP07339 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTSDP07339 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CTSDP07339 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.31□□□□□ -1.88
CTSDP07339 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTSDP07339 OTUD4P1-201ENST00000237841 3067 ntBASIC3.31□□□□□ -1.88
CTSDP07339 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.31□□□□□ -1.88
CTSDP07339 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTSDP07339 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.31□□□□□ -1.88
CTSDP07339 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.31□□□□□ -1.88
CTSDP07339 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.31□□□□□ -1.88
CTSDP07339 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTSDP07339 RPS4XP5-202ENST00000449995 1334 ntBASIC3.31□□□□□ -1.88
CTSDP07339 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.31□□□□□ -1.88
CTSDP07339 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CTSDP07339 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.31□□□□□ -1.88
CTSDP07339 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTSDP07339 RPL23AP26-201ENST00000412728 464 ntBASIC3.31□□□□□ -1.88
CTSDP07339 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.31□□□□□ -1.88
CTSDP07339 RPL7AP73-201ENST00000413490 353 ntBASIC3.31□□□□□ -1.88
CTSDP07339 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.31□□□□□ -1.88
CTSDP07339 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.31□□□□□ -1.88
CTSDP07339 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.31□□□□□ -1.88
CTSDP07339 AC009263.1-201ENST00000441193 1239 ntBASIC3.31□□□□□ -1.88
CTSDP07339 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.31□□□□□ -1.88
CTSDP07339 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.31□□□□□ -1.88
CTSDP07339 RPL5P32-201ENST00000454085 879 ntBASIC3.31□□□□□ -1.88
CTSDP07339 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.31□□□□□ -1.88
CTSDP07339 AC092691.2-201ENST00000461787 803 ntBASIC3.31□□□□□ -1.88
CTSDP07339 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.31□□□□□ -1.88
CTSDP07339 AC006463.2-201ENST00000473326 348 ntBASIC3.31□□□□□ -1.88
CTSDP07339 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.31□□□□□ -1.88
CTSDP07339 IGBP1P5-201ENST00000507524 1000 ntBASIC3.31□□□□□ -1.88
CTSDP07339 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.31□□□□□ -1.88
CTSDP07339 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.31□□□□□ -1.88
CTSDP07339 RN7SKP34-201ENST00000516142 244 ntBASIC3.31□□□□□ -1.88
CTSDP07339 snoU109.6-201ENST00000516831 118 ntBASIC3.31□□□□□ -1.88
CTSDP07339 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.31□□□□□ -1.88
CTSDP07339 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.31□□□□□ -1.88
CTSDP07339 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.31□□□□□ -1.88
CTSDP07339 TRAV8-5-201ENST00000537369 341 ntBASIC3.31□□□□□ -1.88
CTSDP07339 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.31□□□□□ -1.88
CTSDP07339 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.31□□□□□ -1.88
CTSDP07339 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.31□□□□□ -1.88
CTSDP07339 MIR4700-201ENST00000578311 74 ntBASIC3.31□□□□□ -1.88
CTSDP07339 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.31□□□□□ -1.88
CTSDP07339 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.31□□□□□ -1.88
CTSDP07339 AL133247.2-201ENST00000603236 482 ntBASIC3.31□□□□□ -1.88
CTSDP07339 AL034351.1-201ENST00000605288 668 ntBASIC3.31□□□□□ -1.88
CTSDP07339 AL159169.2-201ENST00000610061 1269 ntBASIC3.31□□□□□ -1.88
CTSDP07339 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.31□□□□□ -1.88
CTSDP07339 AC020763.5-201ENST00000623298 430 ntBASIC3.31□□□□□ -1.88
CTSDP07339 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTSDP07339 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.31□□□□□ -1.88
CTSDP07339 EXOC5P1-201ENST00000510543 1969 ntBASIC3.31□□□□□ -1.88
CTSDP07339 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CTSDP07339 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.3□□□□□ -1.88
CTSDP07339 AC139713.2-214ENST00000642059 1811 ntBASIC3.3□□□□□ -1.88
CTSDP07339 CR381670.1-201ENST00000624291 1693 ntBASIC3.3□□□□□ -1.88
CTSDP07339 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTSDP07339 AC066616.2-201ENST00000559334 1481 ntBASIC3.3□□□□□ -1.88
CTSDP07339 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CTSDP07339 HMGB3P19-201ENST00000403971 560 ntBASIC3.3□□□□□ -1.88
CTSDP07339 HSPE1P8-201ENST00000406997 288 ntBASIC3.3□□□□□ -1.88
CTSDP07339 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.3□□□□□ -1.88
CTSDP07339 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.3□□□□□ -1.88
CTSDP07339 RPL21P109-201ENST00000422213 475 ntBASIC3.3□□□□□ -1.88
CTSDP07339 AC115285.1-201ENST00000424879 736 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms