Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LDLRP01130 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LDLRP01130 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LDLRP01130 AC011155.1-201ENST00000316512 456 ntBASIC4.59□□□□□ -1.67
LDLRP01130 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LDLRP01130 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
LDLRP01130 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.59□□□□□ -1.67
LDLRP01130 RNA5SP479-201ENST00000364858 117 ntBASIC4.59□□□□□ -1.67
LDLRP01130 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LDLRP01130 AC234772.1-201ENST00000377927 937 ntBASIC4.59□□□□□ -1.67
LDLRP01130 RNA5SP372-201ENST00000390836 115 ntBASIC4.59□□□□□ -1.67
LDLRP01130 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LDLRP01130 MTND4P13-201ENST00000402078 1023 ntBASIC4.59□□□□□ -1.67
LDLRP01130 HMGB3P18-201ENST00000406327 590 ntBASIC4.59□□□□□ -1.67
LDLRP01130 Z98755.1-201ENST00000407015 1384 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 RPL21P108-201ENST00000413857 481 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.59□□□□□ -1.67
LDLRP01130 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
LDLRP01130 GTF2IP2-201ENST00000424290 697 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.59□□□□□ -1.67
LDLRP01130 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.59□□□□□ -1.67
LDLRP01130 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
LDLRP01130 PPIAP13-201ENST00000434706 478 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.59□□□□□ -1.67
LDLRP01130 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 EIF4A1P11-201ENST00000451239 222 ntBASIC4.59□□□□□ -1.67
LDLRP01130 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 RN7SL244P-201ENST00000493405 297 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AC008427.1-201ENST00000503102 655 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LDLRP01130 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 COX6B1P5-201ENST00000509843 249 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 NPM1P6-201ENST00000521088 871 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AP001636.2-201ENST00000525517 696 ntBASIC4.59□□□□□ -1.67
LDLRP01130 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.59□□□□□ -1.67
LDLRP01130 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LDLRP01130 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.59□□□□□ -1.67
LDLRP01130 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.59□□□□□ -1.67
LDLRP01130 AC025260.1-201ENST00000548858 430 ntBASIC4.59□□□□□ -1.67
LDLRP01130 MTND3P12-201ENST00000559068 328 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AC090888.2-201ENST00000559765 1144 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AL132640.2-201ENST00000559968 1698 ntBASIC4.59□□□□□ -1.67
LDLRP01130 BNIP3P5-201ENST00000562290 498 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 MIR4789-201ENST00000577469 82 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.59□□□□□ -1.67
LDLRP01130 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.59□□□□□ -1.67
LDLRP01130 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.59□□□□□ -1.67
LDLRP01130 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LDLRP01130 AL590392.1-201ENST00000604960 446 ntBASIC4.59□□□□□ -1.67
LDLRP01130 COX6CP4-201ENST00000605798 228 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AC073569.3-201ENST00000619055 682 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AC004232.3-201ENST00000622977 525 ntBASIC4.59□□□□□ -1.67
LDLRP01130 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.59□□□□□ -1.67
LDLRP01130 AC091046.3-201ENST00000631455 1574 ntBASIC4.59□□□□□ -1.67
LDLRP01130 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.59□□□□□ -1.67
LDLRP01130 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.59□□□□□ -1.67
LDLRP01130 CASC19-204ENST00000641001 2055 ntBASIC4.59□□□□□ -1.67
LDLRP01130 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LDLRP01130 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
LDLRP01130 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LDLRP01130 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
LDLRP01130 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
LDLRP01130 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.58□□□□□ -1.68
LDLRP01130 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LDLRP01130 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LDLRP01130 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LDLRP01130 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LDLRP01130 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 AP000756.2-201ENST00000624168 2567 ntBASIC4.58□□□□□ -1.68
LDLRP01130 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 RNA5SP27-201ENST00000363839 119 ntBASIC4.58□□□□□ -1.68
LDLRP01130 RN7SKP227-201ENST00000364445 330 ntBASIC4.58□□□□□ -1.68
LDLRP01130 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LDLRP01130 Z97832.1-201ENST00000402490 328 ntBASIC4.58□□□□□ -1.68
LDLRP01130 RNA5SP113-201ENST00000410486 84 ntBASIC4.58□□□□□ -1.68
LDLRP01130 RNA5SP146-201ENST00000410743 123 ntBASIC4.58□□□□□ -1.68
LDLRP01130 VTA1P1-201ENST00000414044 866 ntBASIC4.58□□□□□ -1.68
LDLRP01130 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.58□□□□□ -1.68
LDLRP01130 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.58□□□□□ -1.68
LDLRP01130 PTP4A1P7-201ENST00000423476 514 ntBASIC4.58□□□□□ -1.68
LDLRP01130 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.58□□□□□ -1.68
LDLRP01130 AL359265.2-201ENST00000434367 631 ntBASIC4.58□□□□□ -1.68
LDLRP01130 RPS7P2-201ENST00000435134 607 ntBASIC4.58□□□□□ -1.68
LDLRP01130 AL353093.1-201ENST00000441292 436 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms