Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL590290.1-201ENST00000405336 380 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.53□□□□□ -1.68
PDGFBP01127 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFBP01127 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFBP01127 RPL7P33-201ENST00000444159 742 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 GEMIN8P3-201ENST00000445417 720 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 AC017099.1-201ENST00000448261 1028 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 MTND5P8-201ENST00000449817 1083 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 HMGB3P21-201ENST00000452483 547 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.53□□□□□ -1.68
PDGFBP01127 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFBP01127 RN7SKP141-201ENST00000516167 338 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.53□□□□□ -1.68
PDGFBP01127 AC105233.3-201ENST00000531125 744 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 NOP56P3-201ENST00000549457 385 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFBP01127 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.53□□□□□ -1.68
PDGFBP01127 CBX3P2-202ENST00000583365 535 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.53□□□□□ -1.68
PDGFBP01127 AC007179.3-201ENST00000604976 235 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.53□□□□□ -1.68
PDGFBP01127 AC006065.6-201ENST00000625201 545 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 CFTRP2-201ENST00000634304 199 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 FRG1EP-201ENST00000634469 770 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
PDGFBP01127 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.53□□□□□ -1.68
PDGFBP01127 AC104623.2-202ENST00000623477 4002 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.53□□□□□ -1.68
PDGFBP01127 Z73965.1-201ENST00000623412 2297 ntBASIC4.53□□□□□ -1.68
PDGFBP01127 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFBP01127 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFBP01127 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.53□□□□□ -1.68
PDGFBP01127 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PDGFBP01127 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
PDGFBP01127 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDGFBP01127 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
PDGFBP01127 AP001273.1-201ENST00000624493 3152 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PDGFBP01127 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFBP01127 AC006042.3-201ENST00000454684 1469 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFBP01127 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFBP01127 AC125257.1-201ENST00000560400 2930 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDGFBP01127 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDGFBP01127 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDGFBP01127 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.52□□□□□ -1.69
PDGFBP01127 ZNF965P-201ENST00000432501 817 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.52□□□□□ -1.69
PDGFBP01127 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.52□□□□□ -1.69
PDGFBP01127 AL590762.3-201ENST00000436372 640 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.52□□□□□ -1.69
PDGFBP01127 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.52□□□□□ -1.69
PDGFBP01127 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.52□□□□□ -1.69
PDGFBP01127 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.52□□□□□ -1.69
PDGFBP01127 RPL35P6-201ENST00000490024 372 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 RN7SL691P-201ENST00000494487 301 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.52□□□□□ -1.69
PDGFBP01127 AC010460.1-201ENST00000507087 466 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 FTH1P21-201ENST00000512179 511 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 RNA5SP49-201ENST00000516450 115 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 TRMT10BP1-201ENST00000519377 943 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.52□□□□□ -1.69
PDGFBP01127 AP002812.4-201ENST00000532139 286 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 CCNG2P1-201ENST00000549521 1000 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.52□□□□□ -1.69
PDGFBP01127 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.52□□□□□ -1.69
PDGFBP01127 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.52□□□□□ -1.69
PDGFBP01127 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.52□□□□□ -1.69
PDGFBP01127 MTCYBP13-201ENST00000578634 1093 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 AC233702.9-201ENST00000581528 203 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.52□□□□□ -1.69
PDGFBP01127 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.52□□□□□ -1.69
PDGFBP01127 AC005242.1-201ENST00000585658 438 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.52□□□□□ -1.69
PDGFBP01127 AC006116.5-201ENST00000591936 559 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 AL160281.1-201ENST00000605307 311 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.52□□□□□ -1.69
PDGFBP01127 AC006213.5-201ENST00000619673 288 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.52□□□□□ -1.69
PDGFBP01127 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PDGFBP01127 CR392039.4-201ENST00000624968 501 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 AC140479.6-201ENST00000633535 357 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.52□□□□□ -1.69
PDGFBP01127 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.52□□□□□ -1.69
PDGFBP01127 AL031119.1-201ENST00000404707 1879 ntBASIC4.52□□□□□ -1.69
PDGFBP01127 MTND4P31-201ENST00000425607 1343 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFBP01127 RNF6P1-201ENST00000444889 1784 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFBP01127 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDGFBP01127 SNORA73.2-201ENST00000364946 201 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 U3.35-201ENST00000408405 208 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 RN7SKP33-201ENST00000410942 340 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 MFSD13B-201ENST00000420133 1290 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 AL138785.1-201ENST00000425821 331 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 BTF3P10-201ENST00000433415 495 ntBASIC4.51□□□□□ -1.69
PDGFBP01127 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.51□□□□□ -1.69
PDGFBP01127 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.51□□□□□ -1.69
PDGFBP01127 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms