Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC090948.2-201ENST00000607363 564 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-2O95096 AC124312.6-202ENST00000623624 418 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 AC009452.1-201ENST00000640823 606 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 MTND4P10-201ENST00000446199 1363 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-2O95096 TLK1P1-201ENST00000456760 2440 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-2O95096 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
NKX2-2O95096 AP005901.5-201ENST00000545779 1796 ntBASIC4.47□□□□□ -1.69
NKX2-2O95096 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.47□□□□□ -1.69
NKX2-2O95096 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.47□□□□□ -1.69
NKX2-2O95096 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
NKX2-2O95096 AC114546.3-201ENST00000623582 1734 ntBASIC4.46□□□□□ -1.69
NKX2-2O95096 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
NKX2-2O95096 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
NKX2-2O95096 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
NKX2-2O95096 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
NKX2-2O95096 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-2O95096 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-2O95096 AC007529.1-201ENST00000418574 2178 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-2O95096 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NKX2-2O95096 AL359922.3-201ENST00000624779 1670 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-2O95096 AC011155.1-201ENST00000316512 456 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-2O95096 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NKX2-2O95096 RNU6-839P-201ENST00000363347 108 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-2O95096 U3.30-201ENST00000391308 210 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-2O95096 AP000580.1-201ENST00000404439 358 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-2O95096 RNA5SP296-201ENST00000410523 111 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-2O95096 E2F6P2-201ENST00000420708 748 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-2O95096 XKRYP1-201ENST00000423438 492 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AL645608.4-201ENST00000423619 154 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 RPL12P28-201ENST00000430852 489 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-2O95096 XKRYP2-201ENST00000432915 492 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 PSMD10P3-201ENST00000437000 448 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-2O95096 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-2O95096 HMGB1P16-201ENST00000447155 540 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NKX2-2O95096 AC079776.3-201ENST00000450665 370 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AC234781.3-201ENST00000452540 973 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AURKAPS2-201ENST00000454983 333 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-2O95096 AC048346.1-201ENST00000510247 144 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AC092593.2-201ENST00000513866 913 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 RN7SKP96-201ENST00000516948 297 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-2O95096 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-2O95096 AC063949.1-201ENST00000552900 865 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 SERPINE4P-201ENST00000554978 281 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-2O95096 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-2O95096 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-2O95096 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.46□□□□□ -1.7
NKX2-2O95096 AC017100.2-201ENST00000584628 355 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AC022726.1-201ENST00000587475 207 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-2O95096 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-2O95096 MTND3P19-201ENST00000603825 345 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AL390816.3-201ENST00000604527 1066 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 AP000255.1-201ENST00000610276 676 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 MIR7155-201ENST00000615925 56 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-2O95096 MIR8069-1-201ENST00000616627 86 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 MIR8069-2-201ENST00000621412 86 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.46□□□□□ -1.7
NKX2-2O95096 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NKX2-2O95096 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.46□□□□□ -1.7
NKX2-2O95096 AC107068.1-201ENST00000563286 4218 ntBASIC4.46□□□□□ -1.7
NKX2-2O95096 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NKX2-2O95096 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
NKX2-2O95096 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NKX2-2O95096 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NKX2-2O95096 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-2O95096 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NKX2-2O95096 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NKX2-2O95096 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 MIR217-201ENST00000384817 110 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 MIR513B-201ENST00000385136 84 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms