Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.5□□□□□ -1.85
UPK1BO75841 CBX1P4-201ENST00000439415 457 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1BO75841 ANP32BP2-201ENST00000454525 545 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.5□□□□□ -1.85
UPK1BO75841 AC024558.1-201ENST00000505008 528 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 AC016550.3-201ENST00000515706 767 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 RNU6-1004P-201ENST00000516584 111 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 IGKV2D-10-201ENST00000520194 281 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.5□□□□□ -1.85
UPK1BO75841 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.5□□□□□ -1.85
UPK1BO75841 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1BO75841 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.5□□□□□ -1.85
UPK1BO75841 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.5□□□□□ -1.85
UPK1BO75841 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.5□□□□□ -1.85
UPK1BO75841 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.5□□□□□ -1.85
UPK1BO75841 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1BO75841 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.5□□□□□ -1.85
UPK1BO75841 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1BO75841 MIR4512-201ENST00000583257 77 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.5□□□□□ -1.85
UPK1BO75841 VN1R84P-201ENST00000593697 235 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 AC022387.2-201ENST00000604050 448 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.5□□□□□ -1.85
UPK1BO75841 EIF3FP1-201ENST00000613970 806 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 AC011472.4-201ENST00000615848 491 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 AC073593.1-201ENST00000624500 411 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 LINC01739-205ENST00000641890 573 ntBASIC3.5□□□□□ -1.85
UPK1BO75841 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.5□□□□□ -1.85
UPK1BO75841 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.5□□□□□ -1.85
UPK1BO75841 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1BO75841 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
UPK1BO75841 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UPK1BO75841 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
UPK1BO75841 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1BO75841 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1BO75841 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.49□□□□□ -1.85
UPK1BO75841 MIR7-1-201ENST00000384871 110 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.49□□□□□ -1.85
UPK1BO75841 SNORA57.3-201ENST00000411095 141 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.49□□□□□ -1.85
UPK1BO75841 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1BO75841 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC3.49□□□□□ -1.85
UPK1BO75841 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1BO75841 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1BO75841 AC023512.1-201ENST00000444513 499 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1BO75841 MRPS31P2-201ENST00000451581 518 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 DHFRP3-201ENST00000455595 559 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.49□□□□□ -1.85
UPK1BO75841 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC3.49□□□□□ -1.85
UPK1BO75841 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1BO75841 HMGB1P47-201ENST00000511281 589 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1BO75841 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1BO75841 MIR4458-201ENST00000578872 75 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 MIR5010-201ENST00000582846 120 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 AC011492.1-201ENST00000600023 315 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 AC010680.3-201ENST00000604215 520 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 AC025175.1-201ENST00000606482 759 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.49□□□□□ -1.85
UPK1BO75841 AL355816.1-201ENST00000607951 118 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.49□□□□□ -1.85
UPK1BO75841 AC135803.1-201ENST00000608748 565 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.49□□□□□ -1.85
UPK1BO75841 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 AC119674.1-220ENST00000641502 1048 ntBASIC3.49□□□□□ -1.85
UPK1BO75841 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1BO75841 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UPK1BO75841 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
UPK1BO75841 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1BO75841 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.48□□□□□ -1.85
UPK1BO75841 AC066616.2-201ENST00000559334 1481 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.48□□□□□ -1.85
UPK1BO75841 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
UPK1BO75841 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1BO75841 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1BO75841 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1BO75841 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1BO75841 OR3A2-201ENST00000408891 1076 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 RNA5SP239-201ENST00000410218 129 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 BX510359.2-201ENST00000417920 305 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 RPS15AP6-201ENST00000420703 385 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 AL031663.1-201ENST00000437445 219 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 SPRYD7P1-201ENST00000443861 570 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 AC098824.1-201ENST00000453565 980 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 AC006539.3-201ENST00000454258 129 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
UPK1BO75841 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.48□□□□□ -1.85
UPK1BO75841 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.48□□□□□ -1.85
UPK1BO75841 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.48□□□□□ -1.85
UPK1BO75841 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC3.48□□□□□ -1.85
UPK1BO75841 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.48□□□□□ -1.85
UPK1BO75841 MIR548Y-201ENST00000582739 110 ntBASIC3.48□□□□□ -1.85
UPK1BO75841 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UPK1BO75841 AC011477.5-201ENST00000586571 259 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 160.8 ms