Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.71□□□□□ -1.66
LDB2O43679 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.71□□□□□ -1.66
LDB2O43679 AC079075.1-201ENST00000559543 878 ntBASIC4.71□□□□□ -1.66
LDB2O43679 AC027104.1-201ENST00000563702 681 ntBASIC4.71□□□□□ -1.66
LDB2O43679 AC009094.1-201ENST00000564443 426 ntBASIC4.71□□□□□ -1.66
LDB2O43679 AC015912.2-201ENST00000571053 181 ntBASIC4.71□□□□□ -1.66
LDB2O43679 MTND4LP24-201ENST00000572277 291 ntBASIC4.71□□□□□ -1.66
LDB2O43679 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LDB2O43679 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.71□□□□□ -1.66
LDB2O43679 MIR4270-201ENST00000581799 70 ntBASIC4.71□□□□□ -1.66
LDB2O43679 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.71□□□□□ -1.66
LDB2O43679 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.71□□□□□ -1.66
LDB2O43679 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
LDB2O43679 AC007349.4-201ENST00000608114 532 ntBASIC4.71□□□□□ -1.66
LDB2O43679 MIR6798-201ENST00000612887 67 ntBASIC4.71□□□□□ -1.66
LDB2O43679 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LDB2O43679 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.71□□□□□ -1.66
LDB2O43679 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.71□□□□□ -1.66
LDB2O43679 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.71□□□□□ -1.66
LDB2O43679 AL359757.1-201ENST00000623176 255 ntBASIC4.71□□□□□ -1.66
LDB2O43679 AC026422.1-201ENST00000623961 452 ntBASIC4.71□□□□□ -1.66
LDB2O43679 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.71□□□□□ -1.66
LDB2O43679 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LDB2O43679 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LDB2O43679 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.71□□□□□ -1.66
LDB2O43679 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LDB2O43679 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.71□□□□□ -1.66
LDB2O43679 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LDB2O43679 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.71□□□□□ -1.66
LDB2O43679 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LDB2O43679 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.7□□□□□ -1.66
LDB2O43679 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.7□□□□□ -1.66
LDB2O43679 ZNF876P-202ENST00000398732 1485 ntBASIC4.7□□□□□ -1.66
LDB2O43679 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LDB2O43679 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.7□□□□□ -1.66
LDB2O43679 SNORD116-2-201ENST00000384274 95 ntBASIC4.7□□□□□ -1.66
LDB2O43679 SNORD116-6-201ENST00000384711 96 ntBASIC4.7□□□□□ -1.66
LDB2O43679 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LDB2O43679 FCF1P5-201ENST00000406490 482 ntBASIC4.7□□□□□ -1.66
LDB2O43679 TCEA1P4-201ENST00000415066 844 ntBASIC4.7□□□□□ -1.66
LDB2O43679 BX510359.2-201ENST00000417920 305 ntBASIC4.7□□□□□ -1.66
LDB2O43679 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.7□□□□□ -1.66
LDB2O43679 AL365338.1-201ENST00000422282 858 ntBASIC4.7□□□□□ -1.66
LDB2O43679 FABP7P1-201ENST00000424004 391 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.7□□□□□ -1.66
LDB2O43679 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 USP9YP11-201ENST00000427537 717 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.7□□□□□ -1.66
LDB2O43679 RPS26P2-201ENST00000440331 348 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.7□□□□□ -1.66
LDB2O43679 AC112492.1-201ENST00000449607 712 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AL122001.1-201ENST00000457027 370 ntBASIC4.7□□□□□ -1.66
LDB2O43679 RPS4XP12-201ENST00000461747 709 ntBASIC4.7□□□□□ -1.66
LDB2O43679 NDUFA5P9-201ENST00000472609 340 ntBASIC4.7□□□□□ -1.66
LDB2O43679 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 AC069528.1-202ENST00000482888 637 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.7□□□□□ -1.66
LDB2O43679 AC118465.1-201ENST00000513820 1271 ntBASIC4.7□□□□□ -1.66
LDB2O43679 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.7□□□□□ -1.66
LDB2O43679 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.7□□□□□ -1.66
LDB2O43679 OSBPL9P5-201ENST00000542581 171 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AC025260.1-201ENST00000548858 430 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AC137768.1-201ENST00000549998 553 ntBASIC4.7□□□□□ -1.66
LDB2O43679 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.7□□□□□ -1.66
LDB2O43679 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.7□□□□□ -1.66
LDB2O43679 AGGF1P6-201ENST00000569213 976 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AC008088.1-201ENST00000580993 280 ntBASIC4.7□□□□□ -1.66
LDB2O43679 SS18L2P2-201ENST00000583960 235 ntBASIC4.7□□□□□ -1.66
LDB2O43679 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.7□□□□□ -1.66
LDB2O43679 AL020997.3-201ENST00000602843 359 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.7□□□□□ -1.66
LDB2O43679 AL135786.2-201ENST00000608422 615 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AC092106.3-201ENST00000611308 722 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AL356274.1-201ENST00000617064 410 ntBASIC4.7□□□□□ -1.66
LDB2O43679 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.7□□□□□ -1.66
LDB2O43679 AL121594.5-201ENST00000631724 573 ntBASIC4.7□□□□□ -1.66
LDB2O43679 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LDB2O43679 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LDB2O43679 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LDB2O43679 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LDB2O43679 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LDB2O43679 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.69□□□□□ -1.66
LDB2O43679 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LDB2O43679 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LDB2O43679 AC111188.2-201ENST00000529697 1387 ntBASIC4.69□□□□□ -1.66
LDB2O43679 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LDB2O43679 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.69□□□□□ -1.66
LDB2O43679 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LDB2O43679 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms