Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL138880.1-201ENST00000405824 642 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 RPS16P5-201ENST00000406501 404 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 RN7SKP216-201ENST00000411050 312 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 TRIM60P17-201ENST00000415181 719 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC4.81□□□□□ -1.64
SMAD6O43541 ATG4AP1-201ENST00000416893 538 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.81□□□□□ -1.64
SMAD6O43541 GLUD1P9-201ENST00000420997 1173 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.81□□□□□ -1.64
SMAD6O43541 MTCO3P30-201ENST00000426425 670 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.81□□□□□ -1.64
SMAD6O43541 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.81□□□□□ -1.64
SMAD6O43541 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.81□□□□□ -1.64
SMAD6O43541 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 RN7SL738P-201ENST00000470264 297 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AC090686.1-201ENST00000481577 749 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.81□□□□□ -1.64
SMAD6O43541 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.81□□□□□ -1.64
SMAD6O43541 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.81□□□□□ -1.64
SMAD6O43541 OR5AN2P-201ENST00000534535 896 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.81□□□□□ -1.64
SMAD6O43541 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.81□□□□□ -1.64
SMAD6O43541 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.81□□□□□ -1.64
SMAD6O43541 CR383656.6-201ENST00000550518 394 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 MTND4P33-201ENST00000556706 766 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AC087477.6-201ENST00000559595 843 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.81□□□□□ -1.64
SMAD6O43541 AC105129.1-201ENST00000560250 297 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.81□□□□□ -1.64
SMAD6O43541 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.81□□□□□ -1.64
SMAD6O43541 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.81□□□□□ -1.64
SMAD6O43541 CYCSP40-201ENST00000575927 294 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 RN7SL52P-201ENST00000584271 284 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.81□□□□□ -1.64
SMAD6O43541 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.81□□□□□ -1.64
SMAD6O43541 AC123786.2-201ENST00000603459 275 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AC092106.3-201ENST00000611308 722 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AL392048.1-201ENST00000613946 534 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 RN7SL722P-201ENST00000617780 284 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 AC015914.2-201ENST00000618167 288 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 RN7SL565P-201ENST00000618246 284 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.81□□□□□ -1.64
SMAD6O43541 AC090617.9-201ENST00000623751 147 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.81□□□□□ -1.64
SMAD6O43541 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.81□□□□□ -1.64
SMAD6O43541 PHKBP1-201ENST00000450951 1951 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 AL731566.1-201ENST00000620490 1937 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SMAD6O43541 AC083843.3-201ENST00000623679 2186 ntBASIC4.81□□□□□ -1.64
SMAD6O43541 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SMAD6O43541 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SMAD6O43541 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
SMAD6O43541 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SMAD6O43541 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 AC009313.2-201ENST00000417893 1941 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AC008079.2-201ENST00000623543 20396 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 OR52B1P-201ENST00000316506 909 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SMAD6O43541 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SMAD6O43541 SNORD116-4-201ENST00000384733 96 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 ST13P16-201ENST00000401760 781 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.8□□□□□ -1.64
SMAD6O43541 AC069213.2-201ENST00000420238 366 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 E2F6P2-201ENST00000420708 748 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.8□□□□□ -1.64
SMAD6O43541 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.8□□□□□ -1.64
SMAD6O43541 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.8□□□□□ -1.64
SMAD6O43541 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.8□□□□□ -1.64
SMAD6O43541 RPL23AP23-201ENST00000452590 471 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 GYG1P1-201ENST00000460864 698 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 RN7SL459P-201ENST00000481078 302 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AC126121.1-201ENST00000482313 553 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.8□□□□□ -1.64
SMAD6O43541 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 AC093770.1-201ENST00000511559 571 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.8□□□□□ -1.64
SMAD6O43541 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.8□□□□□ -1.64
SMAD6O43541 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SMAD6O43541 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.8□□□□□ -1.64
SMAD6O43541 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.8□□□□□ -1.64
SMAD6O43541 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.8□□□□□ -1.64
SMAD6O43541 HMGB3P26-201ENST00000560051 582 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.8□□□□□ -1.64
SMAD6O43541 RN7SL652P-201ENST00000577769 300 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.8□□□□□ -1.64
SMAD6O43541 RN7SL690P-201ENST00000582087 240 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 NBR2-204ENST00000587322 63 ntBASIC4.8□□□□□ -1.64
SMAD6O43541 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms