Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC108145.1-201ENST00000503770 153 ntBASIC6.85□□□□□ -1.31
CUX2O14529 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC6.85□□□□□ -1.31
CUX2O14529 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC6.85□□□□□ -1.31
CUX2O14529 AC006023.1-201ENST00000603944 259 ntBASIC6.85□□□□□ -1.31
CUX2O14529 AL355365.1-201ENST00000616480 294 ntBASIC6.85□□□□□ -1.31
CUX2O14529 AC004656.1-201ENST00000568479 4951 ntBASIC6.85□□□□□ -1.31
CUX2O14529 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUX2O14529 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CUX2O14529 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.85□□□□□ -1.31
CUX2O14529 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CUX2O14529 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUX2O14529 FTLP6-201ENST00000355274 422 ntBASIC6.85□□□□□ -1.31
CUX2O14529 RN7SKP186-201ENST00000365371 303 ntBASIC6.85□□□□□ -1.31
CUX2O14529 SNORD96B-201ENST00000386148 79 ntBASIC6.85□□□□□ -1.31
CUX2O14529 SEPT7P2-202ENST00000398921 823 ntBASIC6.85□□□□□ -1.31
CUX2O14529 AL078604.1-201ENST00000404609 466 ntBASIC6.85□□□□□ -1.31
CUX2O14529 SNORA3.3-201ENST00000408712 125 ntBASIC6.85□□□□□ -1.31
CUX2O14529 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.85□□□□□ -1.31
CUX2O14529 AC087650.1-201ENST00000431445 468 ntBASIC6.85□□□□□ -1.31
CUX2O14529 AC073387.1-201ENST00000453261 709 ntBASIC6.85□□□□□ -1.31
CUX2O14529 AC091516.1-201ENST00000549191 703 ntBASIC6.85□□□□□ -1.31
CUX2O14529 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.85□□□□□ -1.31
CUX2O14529 AC103968.1-201ENST00000557841 573 ntBASIC6.85□□□□□ -1.31
CUX2O14529 AL353726.1-201ENST00000614041 1000 ntBASIC6.85□□□□□ -1.31
CUX2O14529 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC6.84□□□□□ -1.31
CUX2O14529 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.84□□□□□ -1.31
CUX2O14529 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
CUX2O14529 HSPD1P14-201ENST00000432666 1618 ntBASIC6.84□□□□□ -1.31
CUX2O14529 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.84□□□□□ -1.31
CUX2O14529 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CUX2O14529 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CUX2O14529 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CUX2O14529 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.84□□□□□ -1.31
CUX2O14529 BNIP3P41-201ENST00000503774 571 ntBASIC6.84□□□□□ -1.31
CUX2O14529 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.84□□□□□ -1.31
CUX2O14529 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC6.84□□□□□ -1.31
CUX2O14529 AC104763.2-201ENST00000604179 382 ntBASIC6.84□□□□□ -1.31
CUX2O14529 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC6.84□□□□□ -1.31
CUX2O14529 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.84□□□□□ -1.31
CUX2O14529 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
CUX2O14529 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.84□□□□□ -1.32
CUX2O14529 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CUX2O14529 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC6.83□□□□□ -1.32
CUX2O14529 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CUX2O14529 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CUX2O14529 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CUX2O14529 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CUX2O14529 DDX18P4-201ENST00000511690 1966 ntBASIC6.83□□□□□ -1.32
CUX2O14529 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.83□□□□□ -1.32
CUX2O14529 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CUX2O14529 AL121839.2-201ENST00000565058 6943 ntBASIC6.83□□□□□ -1.32
CUX2O14529 RPL23AP57-201ENST00000332361 466 ntBASIC6.83□□□□□ -1.32
CUX2O14529 SNORA38.1-201ENST00000364172 131 ntBASIC6.83□□□□□ -1.32
CUX2O14529 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.83□□□□□ -1.32
CUX2O14529 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.83□□□□□ -1.32
CUX2O14529 RPS3AP46-201ENST00000448352 682 ntBASIC6.83□□□□□ -1.32
CUX2O14529 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.83□□□□□ -1.32
CUX2O14529 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CUX2O14529 AC020914.6-201ENST00000594327 272 ntBASIC6.83□□□□□ -1.32
CUX2O14529 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.83□□□□□ -1.32
CUX2O14529 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC6.83□□□□□ -1.32
CUX2O14529 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
CUX2O14529 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CUX2O14529 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.82□□□□□ -1.32
CUX2O14529 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUX2O14529 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CUX2O14529 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUX2O14529 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CUX2O14529 AL358472.1-201ENST00000431295 329 ntBASIC6.82□□□□□ -1.32
CUX2O14529 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.82□□□□□ -1.32
CUX2O14529 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.82□□□□□ -1.32
CUX2O14529 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUX2O14529 AC092691.2-201ENST00000461787 803 ntBASIC6.82□□□□□ -1.32
CUX2O14529 KC877373.1-201ENST00000479066 408 ntBASIC6.82□□□□□ -1.32
CUX2O14529 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.82□□□□□ -1.32
CUX2O14529 RFPL4AP5-201ENST00000514977 504 ntBASIC6.82□□□□□ -1.32
CUX2O14529 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.82□□□□□ -1.32
CUX2O14529 AC027309.2-201ENST00000520566 192 ntBASIC6.82□□□□□ -1.32
CUX2O14529 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC6.82□□□□□ -1.32
CUX2O14529 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC6.82□□□□□ -1.32
CUX2O14529 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC6.82□□□□□ -1.32
CUX2O14529 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC6.82□□□□□ -1.32
CUX2O14529 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.82□□□□□ -1.32
CUX2O14529 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC6.82□□□□□ -1.32
CUX2O14529 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.82□□□□□ -1.32
CUX2O14529 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUX2O14529 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CUX2O14529 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUX2O14529 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUX2O14529 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUX2O14529 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CUX2O14529 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUX2O14529 RNA5SP97-201ENST00000365006 84 ntBASIC6.81□□□□□ -1.32
CUX2O14529 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.81□□□□□ -1.32
CUX2O14529 RPL36AP13-201ENST00000457490 317 ntBASIC6.81□□□□□ -1.32
CUX2O14529 TAF8-207ENST00000482432 556 ntTSL 2 BASIC6.81□□□□□ -1.32
CUX2O14529 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.81□□□□□ -1.32
CUX2O14529 AC097505.1-201ENST00000610199 565 ntBASIC6.81□□□□□ -1.32
CUX2O14529 AC006386.2-201ENST00000624491 75 ntBASIC6.81□□□□□ -1.32
CUX2O14529 AC012005.1-201ENST00000624575 75 ntBASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms