Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AC107027.3-201ENST00000565095 3473 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 IL6STP1-201ENST00000346911 1020 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AL078604.1-201ENST00000404609 466 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 RNU6-628P-201ENST00000410675 107 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 RN7SKP182-201ENST00000410772 298 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 PPIAP13-201ENST00000434706 478 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 ARL4AP3-201ENST00000441452 574 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 EEF1A1P1-201ENST00000447052 739 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 RPL23AP81-201ENST00000455252 467 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 CDH12P2-201ENST00000504393 298 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AP003049.1-201ENST00000529418 457 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 RPL23AP97-201ENST00000568955 471 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AGGF1P6-201ENST00000569213 976 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 RN7SL600P-201ENST00000581811 299 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 KATNBL1P5-201ENST00000605015 517 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AL096803.3-201ENST00000609032 532 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AC112484.5-201ENST00000624189 228 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 AC027290.2-201ENST00000623210 18662 ntBASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NEDD8-MDP1E9PL57 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 KCTD10P1-201ENST00000434203 625 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AP000936.3-201ENST00000438127 255 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AL513321.1-201ENST00000441175 761 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 HSFY6P-201ENST00000445573 403 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 ATP5G1P3-201ENST00000463301 410 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC093824.1-201ENST00000508796 343 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC021146.3-201ENST00000511911 260 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC099522.1-202ENST00000514718 367 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 RNA5SP73-201ENST00000516744 108 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC018442.3-201ENST00000523025 183 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC233266.2-201ENST00000567067 528 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC006116.5-201ENST00000591936 559 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 RPL7P50-201ENST00000600588 727 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC005034.4-201ENST00000603612 899 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AL109618.2-201ENST00000605527 211 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC097372.4-201ENST00000625025 466 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AP000720.1-201ENST00000625091 483 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC008013.2-202ENST00000637965 364 ntBASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NEDD8-MDP1E9PL57 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 MIR372-201ENST00000362225 67 ntBASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 SNORD96B-201ENST00000386148 79 ntBASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 AL136131.1-201ENST00000406079 803 ntBASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 AL512430.2-201ENST00000406786 339 ntBASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 MTCYBP21-201ENST00000443300 1113 ntBASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 AC006326.1-201ENST00000445465 787 ntBASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.36□□□□□ -1.71
NEDD8-MDP1E9PL57 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms