Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSX2IPQ9Y2D8 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 RLIMP2-201ENST00000427891 1563 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 RPL21P67-201ENST00000402896 478 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 RPS16P5-201ENST00000406501 404 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC105402.1-201ENST00000413336 545 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 MORF4L1P6-201ENST00000418771 268 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 BX119904.4-201ENST00000424402 301 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 C1DP1-201ENST00000426049 402 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 RPL23AP4-201ENST00000427757 463 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 MTND1P29-201ENST00000448112 647 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 RPS29P33-201ENST00000456717 146 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC063943.1-201ENST00000465434 453 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC006967.1-201ENST00000467608 589 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 RN7SL481P-201ENST00000477764 299 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 NIP7P2-201ENST00000485801 544 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC010350.1-201ENST00000504908 231 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC006349.1-201ENST00000555526 235 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 TVP23CP2-201ENST00000571473 623 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC015688.2-201ENST00000584523 262 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC110760.3-201ENST00000598794 467 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AL133507.1-201ENST00000605269 557 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AL391358.1-201ENST00000605342 190 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC012557.2-201ENST00000605919 418 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 MIR6780A-201ENST00000615089 68 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC009318.3-201ENST00000616916 503 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC131159.1-201ENST00000621854 213 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 MIR7641-1-201ENST00000627518 61 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 AC119674.1-212ENST00000641155 993 ntBASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SSX2IPQ9Y2D8 UGT2B26P-201ENST00000508672 1613 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 RNU5A-2P-201ENST00000384337 116 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 RNU6-452P-201ENST00000384406 107 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 MIR141-201ENST00000384975 95 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 RNU6-244P-201ENST00000391028 104 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 HMGB3P7-201ENST00000400214 611 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 SFR1P1-201ENST00000403720 688 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 HMGB3P18-201ENST00000406327 590 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 RPF2P1-201ENST00000424137 906 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AL365396.1-201ENST00000430854 671 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 RPL7P11-201ENST00000437586 658 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AL353093.1-201ENST00000441292 436 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC004980.3-201ENST00000447046 365 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 BX842559.2-201ENST00000451418 605 ntBASIC5.37□□□□□ -1.55
SSX2IPQ9Y2D8 AC009220.1-201ENST00000451614 275 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms