Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 AP001207.1-201ENST00000524051 481 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AC009117.1-201ENST00000563948 554 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 RN7SL356P-201ENST00000582228 248 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AP005262.1-201ENST00000582646 997 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 MIR4691-201ENST00000583764 85 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AP000769.2-201ENST00000602344 396 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AL390816.3-201ENST00000604527 1066 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AC106028.5-201ENST00000610332 395 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AL121873.1-201ENST00000616013 524 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AL356266.1-201ENST00000623311 483 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AC011933.2-201ENST00000578539 2790 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AC011447.7-201ENST00000624228 1590 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 AC092747.4-201ENST00000620519 1861 ntBASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
ZNRF3Q9ULT6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 RNF6P1-201ENST00000444889 1784 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AL121657.1-201ENST00000327215 531 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 RNU1-59P-201ENST00000364829 162 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 DBIP1-201ENST00000401435 260 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 Y_RNA.604-201ENST00000410574 102 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 CHEK2P3-201ENST00000416118 248 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 CYCSP46-201ENST00000423569 204 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 EI24P4-201ENST00000423683 1078 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 SKP1P3-201ENST00000429280 487 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 USP9YP29-201ENST00000445112 563 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 TPTE2P6-202ENST00000445572 1007 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 MTND4P18-201ENST00000447010 465 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 ST13P20-201ENST00000447996 1065 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 HMGN2P25-201ENST00000486956 268 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 BNIP3P41-201ENST00000503774 571 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC109471.1-201ENST00000511631 612 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 RN7SKP31-201ENST00000516354 278 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC021006.3-201ENST00000530771 192 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AL139174.1-201ENST00000531489 886 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 OR7K1P-201ENST00000546439 926 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC012414.6-201ENST00000568241 401 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC083899.3-201ENST00000603413 594 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AL031320.1-201ENST00000604177 357 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC005332.6-201ENST00000613178 446 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 U1.25-201ENST00000614085 162 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC025588.4-201ENST00000615802 908 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC018926.3-201ENST00000618841 406 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 U1.31-201ENST00000620022 160 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC025048.6-202ENST00000627667 438 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC073869.8-201ENST00000641806 335 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 AC073869.10-201ENST00000642016 354 ntBASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
ZNRF3Q9ULT6 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 AC114774.1-201ENST00000507410 1770 ntBASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 SNX18P3-202ENST00000565670 1750 ntBASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 AP000547.3-204ENST00000588548 2523 ntBASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ZNRF3Q9ULT6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms