Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 EOGT-210ENST00000615922 1931 ntBASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 RPL7P59-201ENST00000447700 943 ntBASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 CR383656.14-201ENST00000551951 406 ntBASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 HMGB2P1-201ENST00000591146 634 ntBASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 QTRT1P1-201ENST00000604344 1078 ntBASIC6.14□□□□□ -1.43
RIMBP3Q9UFD9 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 MIR921-201ENST00000401133 56 ntBASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 AC022695.1-201ENST00000522089 237 ntBASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 AL031658.2-201ENST00000616850 651 ntBASIC6.13□□□□□ -1.43
RIMBP3Q9UFD9 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 DDX18P4-201ENST00000511690 1966 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 RPL23AP25-201ENST00000430973 463 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 Z75741.1-201ENST00000446793 314 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 FABP3P2-201ENST00000453169 399 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 OR2A20P-203ENST00000498397 1268 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 AC138409.2-202ENST00000507274 458 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 RNU7-143P-201ENST00000516781 65 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 AL121576.1-201ENST00000556055 276 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 AC023509.5-201ENST00000617434 807 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 AC007998.5-201ENST00000622938 237 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 OFD1P6Y-202ENST00000451061 2724 ntBASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RIMBP3Q9UFD9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 RNU4-35P-201ENST00000362588 141 ntBASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 U3.19-201ENST00000390893 196 ntBASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 AL024507.1-201ENST00000412741 274 ntBASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 RPF2P1-201ENST00000424137 906 ntBASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 RN7SL504P-201ENST00000494496 287 ntBASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 SNORA70.18-201ENST00000516696 98 ntBASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 AC135001.1-201ENST00000544546 283 ntBASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 NPM1P5-201ENST00000557228 838 ntBASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 AC008966.2-201ENST00000606157 453 ntBASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 AL354976.1-201ENST00000613843 387 ntBASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.11□□□□□ -1.43
RIMBP3Q9UFD9 SNORA5B-201ENST00000363786 132 ntBASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 MIR199A2-201ENST00000385289 110 ntBASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 RNA5SP230-201ENST00000517039 122 ntBASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 AC010591.1-201ENST00000603941 649 ntBASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 AL451044.1-201ENST00000604867 238 ntBASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 AL590240.3-201ENST00000621416 943 ntBASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 SNORD35B-201ENST00000363660 87 ntBASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.1□□□□□ -1.43
RIMBP3Q9UFD9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms